Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 GSPT1-206ENST00000563468 1962 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
UBE4BO95155 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
UBE4BO95155 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.47□□□□□ -1.05
UBE4BO95155 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
UBE4BO95155 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC8.47□□□□□ -1.05
UBE4BO95155 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
UBE4BO95155 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC8.47□□□□□ -1.05
UBE4BO95155 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC8.47□□□□□ -1.05
UBE4BO95155 NVL-212ENST00000469968 2510 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
UBE4BO95155 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
UBE4BO95155 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
UBE4BO95155 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC8.47□□□□□ -1.05
UBE4BO95155 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC8.47□□□□□ -1.05
UBE4BO95155 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC8.47□□□□□ -1.05
UBE4BO95155 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.47□□□□□ -1.05
UBE4BO95155 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.47□□□□□ -1.05
UBE4BO95155 RNA5SP463-201ENST00000363030 120 ntBASIC8.47□□□□□ -1.05
UBE4BO95155 CST13P-201ENST00000376992 428 ntBASIC8.47□□□□□ -1.05
UBE4BO95155 MED15P8-201ENST00000411601 545 ntBASIC8.47□□□□□ -1.05
UBE4BO95155 NFU1P1-201ENST00000413128 774 ntBASIC8.47□□□□□ -1.05
UBE4BO95155 AL590240.2-201ENST00000413370 894 ntBASIC8.47□□□□□ -1.05
UBE4BO95155 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC8.47□□□□□ -1.05
UBE4BO95155 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC8.47□□□□□ -1.05
UBE4BO95155 RPL23AP34-201ENST00000423483 410 ntBASIC8.47□□□□□ -1.05
UBE4BO95155 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC8.47□□□□□ -1.05
UBE4BO95155 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC8.47□□□□□ -1.05
UBE4BO95155 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC8.47□□□□□ -1.05
UBE4BO95155 AC109811.2-201ENST00000509609 452 ntBASIC8.47□□□□□ -1.05
UBE4BO95155 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC8.47□□□□□ -1.05
UBE4BO95155 AP001781.2-201ENST00000529841 783 ntTSL 3 BASIC8.47□□□□□ -1.05
UBE4BO95155 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC8.47□□□□□ -1.05
UBE4BO95155 MIR3137-201ENST00000577367 75 ntBASIC8.47□□□□□ -1.05
UBE4BO95155 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC8.47□□□□□ -1.05
UBE4BO95155 AC139795.3-201ENST00000606358 541 ntBASIC8.47□□□□□ -1.05
UBE4BO95155 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC8.47□□□□□ -1.05
UBE4BO95155 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC8.47□□□□□ -1.05
UBE4BO95155 AC138904.2-201ENST00000614412 107 ntBASIC8.47□□□□□ -1.05
UBE4BO95155 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
UBE4BO95155 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC8.47□□□□□ -1.05
UBE4BO95155 RPL36AP21-202ENST00000639134 430 ntBASIC8.47□□□□□ -1.05
UBE4BO95155 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
UBE4BO95155 TRIM51FP-201ENST00000526452 1353 ntBASIC8.47□□□□□ -1.05
UBE4BO95155 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
UBE4BO95155 OR7E11P-202ENST00000642027 1491 ntBASIC8.47□□□□□ -1.05
UBE4BO95155 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC8.47□□□□□ -1.05
UBE4BO95155 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
UBE4BO95155 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
UBE4BO95155 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
UBE4BO95155 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
UBE4BO95155 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
UBE4BO95155 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
UBE4BO95155 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
UBE4BO95155 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.46□□□□□ -1.05
UBE4BO95155 MARK2P10-201ENST00000454959 1437 ntBASIC8.46□□□□□ -1.05
UBE4BO95155 PSMC1P7-201ENST00000495689 1315 ntBASIC8.46□□□□□ -1.05
UBE4BO95155 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC8.46□□□□□ -1.05
UBE4BO95155 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
UBE4BO95155 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.05
UBE4BO95155 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
UBE4BO95155 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
UBE4BO95155 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
UBE4BO95155 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
UBE4BO95155 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
UBE4BO95155 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
UBE4BO95155 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
UBE4BO95155 MIR555-201ENST00000384987 96 ntBASIC8.46□□□□□ -1.06
UBE4BO95155 AL109918.1-202ENST00000406724 436 ntBASIC8.46□□□□□ -1.06
UBE4BO95155 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC8.46□□□□□ -1.06
UBE4BO95155 AC003071.2-201ENST00000423857 315 ntBASIC8.46□□□□□ -1.06
UBE4BO95155 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC8.46□□□□□ -1.06
UBE4BO95155 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC8.46□□□□□ -1.06
UBE4BO95155 RPE-205ENST00000429907 925 ntTSL 2 BASIC8.46□□□□□ -1.06
UBE4BO95155 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
UBE4BO95155 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC8.46□□□□□ -1.06
UBE4BO95155 AL031736.1-201ENST00000449688 618 ntBASIC8.46□□□□□ -1.06
UBE4BO95155 FTH1P7-201ENST00000450676 552 ntBASIC8.46□□□□□ -1.06
UBE4BO95155 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC8.46□□□□□ -1.06
UBE4BO95155 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC8.46□□□□□ -1.06
UBE4BO95155 AL445187.1-201ENST00000502685 260 ntBASIC8.46□□□□□ -1.06
UBE4BO95155 AC079768.1-201ENST00000503181 711 ntBASIC8.46□□□□□ -1.06
UBE4BO95155 NDFIP1P1-201ENST00000543144 525 ntBASIC8.46□□□□□ -1.06
UBE4BO95155 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC8.46□□□□□ -1.06
UBE4BO95155 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
UBE4BO95155 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC8.46□□□□□ -1.06
UBE4BO95155 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC8.46□□□□□ -1.06
UBE4BO95155 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC8.46□□□□□ -1.06
UBE4BO95155 SNX29P2-204ENST00000603801 875 ntBASIC8.46□□□□□ -1.06
UBE4BO95155 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC8.46□□□□□ -1.06
UBE4BO95155 5S_rRNA.20-201ENST00000612104 118 ntBASIC8.46□□□□□ -1.06
UBE4BO95155 CPEB1-AS1-202ENST00000618020 2994 ntBASIC8.46□□□□□ -1.06
UBE4BO95155 AC005790.1-201ENST00000619774 450 ntBASIC8.46□□□□□ -1.06
UBE4BO95155 PFN1P2-202ENST00000621347 397 ntBASIC8.46□□□□□ -1.06
UBE4BO95155 MFSD8-234ENST00000641503 1082 ntBASIC8.46□□□□□ -1.06
UBE4BO95155 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
UBE4BO95155 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
UBE4BO95155 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
UBE4BO95155 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
UBE4BO95155 AC087501.5-201ENST00000607496 2374 ntBASIC8.46□□□□□ -1.06
UBE4BO95155 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
UBE4BO95155 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms