Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.21□□□□□ -1.1
LMO3Q8TAP4 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC8.21□□□□□ -1.1
LMO3Q8TAP4 AC104964.2-201ENST00000562242 4641 ntBASIC8.2□□□□□ -1.1
LMO3Q8TAP4 AC090983.1-201ENST00000623426 3897 ntBASIC8.2□□□□□ -1.1
LMO3Q8TAP4 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 CREM-214ENST00000395887 849 ntTSL 5 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 AL022100.1-202ENST00000421214 548 ntBASIC8.2□□□□□ -1.1
LMO3Q8TAP4 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 RPL12P40-201ENST00000467028 488 ntBASIC8.2□□□□□ -1.1
LMO3Q8TAP4 CREM-224ENST00000468236 582 ntTSL 3 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 CREM-234ENST00000484283 660 ntTSL 5 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 RN7SL519P-201ENST00000497925 288 ntBASIC8.2□□□□□ -1.1
LMO3Q8TAP4 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 TUBAP4-201ENST00000569261 416 ntBASIC8.2□□□□□ -1.1
LMO3Q8TAP4 AC006557.4-201ENST00000585516 830 ntBASIC8.2□□□□□ -1.1
LMO3Q8TAP4 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 AC005518.2-201ENST00000603254 282 ntBASIC8.2□□□□□ -1.1
LMO3Q8TAP4 FAM74A6-203ENST00000615956 481 ntBASIC8.2□□□□□ -1.1
LMO3Q8TAP4 AC073488.8-201ENST00000631952 757 ntBASIC8.2□□□□□ -1.1
LMO3Q8TAP4 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 CD36-214ENST00000447544 2298 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LMO3Q8TAP4 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 PPCS-204ENST00000372562 966 ntTSL 2 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 RN7SL870P-201ENST00000460111 296 ntBASIC8.19□□□□□ -1.1
LMO3Q8TAP4 RN7SL685P-201ENST00000476271 298 ntBASIC8.19□□□□□ -1.1
LMO3Q8TAP4 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 AC023794.3-204ENST00000510754 236 ntBASIC8.19□□□□□ -1.1
LMO3Q8TAP4 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 IGLV10-67-201ENST00000519446 325 ntBASIC8.19□□□□□ -1.1
LMO3Q8TAP4 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 AC090415.1-201ENST00000581877 847 ntBASIC8.19□□□□□ -1.1
LMO3Q8TAP4 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 HNRNPA1P67-201ENST00000604027 926 ntBASIC8.19□□□□□ -1.1
LMO3Q8TAP4 MIR6732-201ENST00000619365 60 ntBASIC8.19□□□□□ -1.1
LMO3Q8TAP4 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 HSPA8P11-201ENST00000508840 1898 ntBASIC8.19□□□□□ -1.1
LMO3Q8TAP4 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 AC090132.1-201ENST00000524071 1480 ntBASIC8.19□□□□□ -1.1
LMO3Q8TAP4 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LMO3Q8TAP4 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms