Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
POLR2AP24928 SERPINA1-207ENST00000440909 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
POLR2AP24928 IL6ST-206ENST00000381298 9057 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
POLR2AP24928 AC009148.1-201ENST00000570148 2693 ntBASIC8.94□□□□□ -0.98
POLR2AP24928 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC8.93□□□□□ -0.98
POLR2AP24928 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
POLR2AP24928 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC8.93□□□□□ -0.98
POLR2AP24928 GTF2F2P2-201ENST00000445825 721 ntBASIC8.93□□□□□ -0.98
POLR2AP24928 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC8.93□□□□□ -0.98
POLR2AP24928 AC116917.1-201ENST00000520558 305 ntBASIC8.93□□□□□ -0.98
POLR2AP24928 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC8.93□□□□□ -0.98
POLR2AP24928 COX4I1P1-201ENST00000554239 509 ntBASIC8.93□□□□□ -0.98
POLR2AP24928 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC8.93□□□□□ -0.98
POLR2AP24928 AC018880.1-201ENST00000418898 1319 ntBASIC8.93□□□□□ -0.98
POLR2AP24928 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
POLR2AP24928 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC8.93□□□□□ -0.98
POLR2AP24928 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
POLR2AP24928 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC8.93□□□□□ -0.98
POLR2AP24928 PIGR-201ENST00000356495 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
POLR2AP24928 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC8.93□□□□□ -0.98
POLR2AP24928 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC8.93□□□□□ -0.98
POLR2AP24928 DHX29-201ENST00000251636 4502 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
POLR2AP24928 AL139327.1-201ENST00000382988 348 ntBASIC8.93□□□□□ -0.98
POLR2AP24928 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC8.93□□□□□ -0.98
POLR2AP24928 RN7SL152P-201ENST00000484176 298 ntBASIC8.93□□□□□ -0.98
POLR2AP24928 AC079594.1-201ENST00000489757 331 ntBASIC8.93□□□□□ -0.98
POLR2AP24928 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
POLR2AP24928 RN7SL835P-201ENST00000579920 262 ntBASIC8.93□□□□□ -0.98
POLR2AP24928 U47924.1-201ENST00000606539 434 ntBASIC8.93□□□□□ -0.98
POLR2AP24928 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC8.93□□□□□ -0.98
POLR2AP24928 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC8.93□□□□□ -0.98
POLR2AP24928 PTK2B-205ENST00000420218 3941 ntTSL 5 BASIC8.93□□□□□ -0.98
POLR2AP24928 LRRC7-201ENST00000035383 5000 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
POLR2AP24928 CTAGE3P-201ENST00000454280 2404 ntBASIC8.93□□□□□ -0.98
POLR2AP24928 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
POLR2AP24928 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
POLR2AP24928 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC8.93□□□□□ -0.98
POLR2AP24928 AC132825.3-201ENST00000562182 4710 ntBASIC8.93□□□□□ -0.98
POLR2AP24928 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC8.93□□□□□ -0.98
POLR2AP24928 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
POLR2AP24928 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
POLR2AP24928 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
POLR2AP24928 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
POLR2AP24928 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
POLR2AP24928 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
POLR2AP24928 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC8.92□□□□□ -0.98
POLR2AP24928 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC8.92□□□□□ -0.98
POLR2AP24928 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
POLR2AP24928 KIF24-201ENST00000379174 5729 ntTSL 5 BASIC8.92□□□□□ -0.98
POLR2AP24928 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
POLR2AP24928 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
POLR2AP24928 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
POLR2AP24928 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
POLR2AP24928 RNA5SP23-201ENST00000391006 105 ntBASIC8.92□□□□□ -0.98
POLR2AP24928 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC8.92□□□□□ -0.98
POLR2AP24928 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC8.92□□□□□ -0.98
POLR2AP24928 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC8.92□□□□□ -0.98
POLR2AP24928 AC005518.2-201ENST00000603254 282 ntBASIC8.92□□□□□ -0.98
POLR2AP24928 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC8.92□□□□□ -0.98
POLR2AP24928 AL161420.1-201ENST00000619393 264 ntBASIC8.92□□□□□ -0.98
POLR2AP24928 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC8.92□□□□□ -0.98
POLR2AP24928 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
POLR2AP24928 PTGS1-203ENST00000373698 4987 ntTSL 2 BASIC8.92□□□□□ -0.98
POLR2AP24928 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
POLR2AP24928 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
POLR2AP24928 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
POLR2AP24928 SIPA1L2-203ENST00000366630 6690 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
POLR2AP24928 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC8.92□□□□□ -0.98
POLR2AP24928 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
POLR2AP24928 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
POLR2AP24928 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
POLR2AP24928 AC092042.2-201ENST00000417304 331 ntBASIC8.92□□□□□ -0.98
POLR2AP24928 OR7E117P-201ENST00000422682 1112 ntBASIC8.92□□□□□ -0.98
POLR2AP24928 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC8.92□□□□□ -0.98
POLR2AP24928 PSPC1P1-201ENST00000442352 665 ntBASIC8.92□□□□□ -0.98
POLR2AP24928 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC8.92□□□□□ -0.98
POLR2AP24928 AC010442.1-201ENST00000515583 816 ntBASIC8.92□□□□□ -0.98
POLR2AP24928 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC8.92□□□□□ -0.98
POLR2AP24928 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC8.92□□□□□ -0.98
POLR2AP24928 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC8.92□□□□□ -0.98
POLR2AP24928 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.92□□□□□ -0.98
POLR2AP24928 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
POLR2AP24928 AL359091.2-201ENST00000609303 556 ntBASIC8.92□□□□□ -0.98
POLR2AP24928 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
POLR2AP24928 PLP1-223ENST00000621218 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
POLR2AP24928 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
POLR2AP24928 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
POLR2AP24928 MYLK-220ENST00000578202 1447 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
POLR2AP24928 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC8.91□□□□□ -0.98
POLR2AP24928 SF3A3P1-201ENST00000446317 1477 ntBASIC8.91□□□□□ -0.98
POLR2AP24928 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
POLR2AP24928 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
POLR2AP24928 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
POLR2AP24928 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
POLR2AP24928 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
POLR2AP24928 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
POLR2AP24928 MIR555-201ENST00000384987 96 ntBASIC8.91□□□□□ -0.98
POLR2AP24928 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
POLR2AP24928 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC8.91□□□□□ -0.98
POLR2AP24928 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms