Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 BMS1P8-201ENST00000565049 1178 ntBASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 AC233699.1-201ENST00000569955 1168 ntBASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 RN7SL25P-201ENST00000583862 260 ntBASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 AL109918.2-201ENST00000605188 279 ntBASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 ZNF713-206ENST00000633730 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 AL355312.2-201ENST00000455607 1541 ntTSL 5 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 GANC-206ENST00000566442 2512 ntTSL 2 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPIPA3F8WFD2 ATP13A4-201ENST00000295548 2157 ntTSL 5 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 AL591848.3-201ENST00000570141 2968 ntBASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 CASC20-201ENST00000415932 1484 ntTSL 5 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 RPE-205ENST00000429907 925 ntTSL 2 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 ST13P2-201ENST00000438916 1109 ntBASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 RBM22P5-201ENST00000449536 1277 ntBASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 AC127024.1-201ENST00000490847 418 ntBASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 AC114300.1-201ENST00000502347 280 ntBASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 OR4A11P-201ENST00000529557 906 ntBASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 THAP2-202ENST00000547843 672 ntTSL 2 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 AC098850.2-201ENST00000578710 686 ntTSL 5 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 OR6L2P-201ENST00000608207 925 ntBASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 CGA-202ENST00000610310 615 ntTSL 3 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPIPA3F8WFD2 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 RNA5SP378-201ENST00000363646 120 ntBASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 PHBP1-201ENST00000392260 808 ntBASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC7.19□□□□□ -1.26
NPIPA3F8WFD2 HSPE1P27-201ENST00000430808 296 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms