Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RN7SL371P-201ENST00000578099 267 ntBASIC8.18□□□□□ -1.1
SLC1A1P43005 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC8.18□□□□□ -1.1
SLC1A1P43005 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC8.18□□□□□ -1.1
SLC1A1P43005 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC8.18□□□□□ -1.1
SLC1A1P43005 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC8.18□□□□□ -1.1
SLC1A1P43005 TPK1-214ENST00000639328 826 ntTSL 5 BASIC8.18□□□□□ -1.1
SLC1A1P43005 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
SLC1A1P43005 HYDIN2-203ENST00000614586 13885 ntBASIC8.18□□□□□ -1.1
SLC1A1P43005 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC8.18□□□□□ -1.1
SLC1A1P43005 AP000705.2-201ENST00000433524 1386 ntBASIC8.18□□□□□ -1.1
SLC1A1P43005 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC8.18□□□□□ -1.1
SLC1A1P43005 AP000766.1-201ENST00000561746 4140 ntBASIC8.18□□□□□ -1.1
SLC1A1P43005 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
SLC1A1P43005 SALL1P1-201ENST00000438101 3837 ntBASIC8.18□□□□□ -1.1
SLC1A1P43005 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SLC1A1P43005 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SLC1A1P43005 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SLC1A1P43005 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SLC1A1P43005 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SLC1A1P43005 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SLC1A1P43005 AC009948.3-201ENST00000603415 1798 ntBASIC8.17□□□□□ -1.1
SLC1A1P43005 FBN2-203ENST00000507835 1884 ntTSL 5 BASIC8.17□□□□□ -1.1
SLC1A1P43005 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC8.17□□□□□ -1.1
SLC1A1P43005 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SLC1A1P43005 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
SLC1A1P43005 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC8.17□□□□□ -1.1
SLC1A1P43005 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.17□□□□□ -1.1
SLC1A1P43005 IL36G-202ENST00000376489 989 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SLC1A1P43005 SSX9-201ENST00000376909 591 ntBASIC8.17□□□□□ -1.1
SLC1A1P43005 VN2R17P-201ENST00000391712 832 ntBASIC8.17□□□□□ -1.1
SLC1A1P43005 RN7SKP119-201ENST00000410753 273 ntBASIC8.17□□□□□ -1.1
SLC1A1P43005 HSD3BP5-201ENST00000434856 1132 ntBASIC8.17□□□□□ -1.1
SLC1A1P43005 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC8.17□□□□□ -1.1
SLC1A1P43005 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC8.17□□□□□ -1.1
SLC1A1P43005 FGF12-206ENST00000450716 768 ntTSL 5 BASIC8.17□□□□□ -1.1
SLC1A1P43005 AL357037.1-201ENST00000454758 322 ntBASIC8.17□□□□□ -1.1
SLC1A1P43005 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC8.17□□□□□ -1.1
SLC1A1P43005 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC8.17□□□□□ -1.1
SLC1A1P43005 MTND6P19-201ENST00000519399 524 ntBASIC8.17□□□□□ -1.1
SLC1A1P43005 AC016954.1-201ENST00000549976 745 ntBASIC8.17□□□□□ -1.1
SLC1A1P43005 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC8.17□□□□□ -1.1
SLC1A1P43005 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.17□□□□□ -1.1
SLC1A1P43005 AC012301.1-201ENST00000586391 581 ntTSL 2 BASIC8.17□□□□□ -1.1
SLC1A1P43005 AC016999.2-201ENST00000614692 556 ntBASIC8.17□□□□□ -1.1
SLC1A1P43005 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC8.17□□□□□ -1.1
SLC1A1P43005 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC8.17□□□□□ -1.1
SLC1A1P43005 AC025162.2-201ENST00000619602 560 ntBASIC8.17□□□□□ -1.1
SLC1A1P43005 GSTTP1-204ENST00000621179 920 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
SLC1A1P43005 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC8.17□□□□□ -1.1
SLC1A1P43005 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
SLC1A1P43005 HLA-B-257ENST00000640094 147 ntBASIC8.17□□□□□ -1.1
SLC1A1P43005 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SLC1A1P43005 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.17□□□□□ -1.1
SLC1A1P43005 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
SLC1A1P43005 AC245505.2-201ENST00000553572 3055 ntBASIC8.17□□□□□ -1.1
SLC1A1P43005 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC8.17□□□□□ -1.1
SLC1A1P43005 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC8.17□□□□□ -1.1
SLC1A1P43005 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SLC1A1P43005 MITF-202ENST00000314589 1993 ntTSL 2 BASIC8.17□□□□□ -1.1
SLC1A1P43005 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC8.17□□□□□ -1.1
SLC1A1P43005 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
SLC1A1P43005 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
SLC1A1P43005 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC8.16□□□□□ -1.1
SLC1A1P43005 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.16□□□□□ -1.1
SLC1A1P43005 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
SLC1A1P43005 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
SLC1A1P43005 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SLC1A1P43005 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SLC1A1P43005 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SLC1A1P43005 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SLC1A1P43005 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
SLC1A1P43005 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
SLC1A1P43005 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC8.16□□□□□ -1.1
SLC1A1P43005 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SLC1A1P43005 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC8.16□□□□□ -1.1
SLC1A1P43005 AC034228.1-201ENST00000424244 923 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SLC1A1P43005 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC8.16□□□□□ -1.1
SLC1A1P43005 RPL3P8-201ENST00000432928 1191 ntBASIC8.16□□□□□ -1.1
SLC1A1P43005 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC8.16□□□□□ -1.1
SLC1A1P43005 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC8.16□□□□□ -1.1
SLC1A1P43005 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SLC1A1P43005 AC234782.3-201ENST00000461229 433 ntBASIC8.16□□□□□ -1.1
SLC1A1P43005 RPL12P5-201ENST00000475149 392 ntBASIC8.16□□□□□ -1.1
SLC1A1P43005 RN7SL862P-201ENST00000491550 298 ntBASIC8.16□□□□□ -1.1
SLC1A1P43005 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SLC1A1P43005 AP001636.1-201ENST00000531997 1122 ntBASIC8.16□□□□□ -1.1
SLC1A1P43005 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC8.16□□□□□ -1.1
SLC1A1P43005 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC8.16□□□□□ -1.1
SLC1A1P43005 AEBP2-207ENST00000541908 975 ntAPPRIS ALT2 TSL 3 BASIC8.16□□□□□ -1.1
SLC1A1P43005 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC8.16□□□□□ -1.1
SLC1A1P43005 AF146191.1-201ENST00000604941 889 ntBASIC8.16□□□□□ -1.1
SLC1A1P43005 AC105339.4-201ENST00000624471 737 ntBASIC8.16□□□□□ -1.1
SLC1A1P43005 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC8.16□□□□□ -1.1
SLC1A1P43005 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.16□□□□□ -1.1
SLC1A1P43005 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SLC1A1P43005 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
SLC1A1P43005 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SLC1A1P43005 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.15□□□□□ -1.1
SLC1A1P43005 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
SLC1A1P43005 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms