Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHA3Q9Y5H8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.07■□□□□ 0.96
PCDHA3Q9Y5H8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHA3Q9Y5H8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA3Q9Y5H8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA3Q9Y5H8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHA3Q9Y5H8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA3Q9Y5H8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PCDHA3Q9Y5H8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA3Q9Y5H8 CYP21A1P-202ENST00000354927 1481 ntBASIC21.07■□□□□ 0.96
PCDHA3Q9Y5H8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PCDHA3Q9Y5H8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PCDHA3Q9Y5H8 AL158211.5-201ENST00000623583 2518 ntBASIC21.06■□□□□ 0.96
PCDHA3Q9Y5H8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA3Q9Y5H8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PCDHA3Q9Y5H8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
PCDHA3Q9Y5H8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PCDHA3Q9Y5H8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDHA3Q9Y5H8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHA3Q9Y5H8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA3Q9Y5H8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDHA3Q9Y5H8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA3Q9Y5H8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHA3Q9Y5H8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA3Q9Y5H8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA3Q9Y5H8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA3Q9Y5H8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHA3Q9Y5H8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
PCDHA3Q9Y5H8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHA3Q9Y5H8 AL162412.1-201ENST00000567129 965 ntBASIC21.05■□□□□ 0.96
PCDHA3Q9Y5H8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDHA3Q9Y5H8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHA3Q9Y5H8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHA3Q9Y5H8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHA3Q9Y5H8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
PCDHA3Q9Y5H8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHA3Q9Y5H8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHA3Q9Y5H8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHA3Q9Y5H8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA3Q9Y5H8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
PCDHA3Q9Y5H8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHA3Q9Y5H8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDHA3Q9Y5H8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHA3Q9Y5H8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA3Q9Y5H8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHA3Q9Y5H8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA3Q9Y5H8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 AC034268.1-201ENST00000441047 882 ntBASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 AC007322.4-201ENST00000509611 723 ntBASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA3Q9Y5H8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 AC016405.3-201ENST00000607710 860 ntBASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHA3Q9Y5H8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
PCDHA3Q9Y5H8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHA3Q9Y5H8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PCDHA3Q9Y5H8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA3Q9Y5H8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHA3Q9Y5H8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PCDHA3Q9Y5H8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA3Q9Y5H8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA3Q9Y5H8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA3Q9Y5H8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHA3Q9Y5H8 AC116562.4-201ENST00000641316 2276 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms