Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB6Q9Y5F9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB6Q9Y5F9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGB6Q9Y5F9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB6Q9Y5F9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDHGB6Q9Y5F9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB6Q9Y5F9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHGB6Q9Y5F9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHGB6Q9Y5F9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGB6Q9Y5F9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB6Q9Y5F9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB6Q9Y5F9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB6Q9Y5F9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGB6Q9Y5F9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PCDHGB6Q9Y5F9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB6Q9Y5F9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGB6Q9Y5F9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 DUSP5P2-201ENST00000426873 1033 ntBASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB6Q9Y5F9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 LSM12P1-201ENST00000411836 588 ntBASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB6Q9Y5F9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.96■□□□□ 0.63
PCDHGB6Q9Y5F9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB6Q9Y5F9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
PCDHGB6Q9Y5F9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB6Q9Y5F9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHGB6Q9Y5F9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB6Q9Y5F9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB6Q9Y5F9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PCDHGB6Q9Y5F9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB6Q9Y5F9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB6Q9Y5F9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB6Q9Y5F9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
PCDHGB6Q9Y5F9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms