Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC27.71■■■□□ 2.03
NINLQ9Y2I6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
NINLQ9Y2I6 AF106564.1-201ENST00000607058 2553 ntBASIC27.71■■■□□ 2.03
NINLQ9Y2I6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
NINLQ9Y2I6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
NINLQ9Y2I6 AC012618.2-201ENST00000428058 849 ntBASIC27.71■■■□□ 2.03
NINLQ9Y2I6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
NINLQ9Y2I6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC27.71■■■□□ 2.03
NINLQ9Y2I6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC27.71■■■□□ 2.03
NINLQ9Y2I6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC27.71■■■□□ 2.03
NINLQ9Y2I6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC27.71■■■□□ 2.03
NINLQ9Y2I6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC27.71■■■□□ 2.03
NINLQ9Y2I6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
NINLQ9Y2I6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC27.71■■■□□ 2.03
NINLQ9Y2I6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
NINLQ9Y2I6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.03
NINLQ9Y2I6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
NINLQ9Y2I6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
NINLQ9Y2I6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC27.7■■■□□ 2.03
NINLQ9Y2I6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
NINLQ9Y2I6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC27.7■■■□□ 2.02
NINLQ9Y2I6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC27.7■■■□□ 2.02
NINLQ9Y2I6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
NINLQ9Y2I6 AL121906.2-201ENST00000621597 723 ntBASIC27.7■■■□□ 2.02
NINLQ9Y2I6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
NINLQ9Y2I6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
NINLQ9Y2I6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
NINLQ9Y2I6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
NINLQ9Y2I6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
NINLQ9Y2I6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
NINLQ9Y2I6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
NINLQ9Y2I6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
NINLQ9Y2I6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
NINLQ9Y2I6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
NINLQ9Y2I6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
NINLQ9Y2I6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
NINLQ9Y2I6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
NINLQ9Y2I6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC27.68■■■□□ 2.02
NINLQ9Y2I6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC27.68■■■□□ 2.02
NINLQ9Y2I6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC27.68■■■□□ 2.02
NINLQ9Y2I6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
NINLQ9Y2I6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
NINLQ9Y2I6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 AL023875.1-201ENST00000640777 796 ntBASIC27.67■■■□□ 2.02
NINLQ9Y2I6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC27.67■■■□□ 2.02
NINLQ9Y2I6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
NINLQ9Y2I6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
NINLQ9Y2I6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC27.66■■■□□ 2.02
NINLQ9Y2I6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC27.66■■■□□ 2.02
NINLQ9Y2I6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
NINLQ9Y2I6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
NINLQ9Y2I6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC27.66■■■□□ 2.02
NINLQ9Y2I6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC27.66■■■□□ 2.02
NINLQ9Y2I6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
NINLQ9Y2I6 HLA-G-202ENST00000376815 851 ntBASIC27.66■■■□□ 2.02
NINLQ9Y2I6 HLA-G-203ENST00000376818 1127 ntBASIC27.66■■■□□ 2.02
NINLQ9Y2I6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC27.66■■■□□ 2.02
NINLQ9Y2I6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC27.66■■■□□ 2.02
NINLQ9Y2I6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC27.66■■■□□ 2.02
NINLQ9Y2I6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
NINLQ9Y2I6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
NINLQ9Y2I6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC27.66■■■□□ 2.02
NINLQ9Y2I6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC27.66■■■□□ 2.02
NINLQ9Y2I6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
NINLQ9Y2I6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
NINLQ9Y2I6 KRT8P20-201ENST00000423953 1409 ntBASIC27.65■■■□□ 2.02
NINLQ9Y2I6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
NINLQ9Y2I6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC27.65■■■□□ 2.02
NINLQ9Y2I6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
NINLQ9Y2I6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC27.65■■■□□ 2.02
NINLQ9Y2I6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC27.65■■■□□ 2.02
NINLQ9Y2I6 KRT18P21-201ENST00000515767 1272 ntBASIC27.65■■■□□ 2.02
NINLQ9Y2I6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC27.65■■■□□ 2.02
NINLQ9Y2I6 MIR4497-201ENST00000583208 89 ntBASIC27.65■■■□□ 2.02
NINLQ9Y2I6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
NINLQ9Y2I6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
NINLQ9Y2I6 AC110285.5-201ENST00000611501 352 ntBASIC27.65■■■□□ 2.02
NINLQ9Y2I6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC27.65■■■□□ 2.02
NINLQ9Y2I6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
NINLQ9Y2I6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.02
NINLQ9Y2I6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC27.65■■■□□ 2.02
NINLQ9Y2I6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
NINLQ9Y2I6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC27.64■■■□□ 2.02
NINLQ9Y2I6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC27.64■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms