Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERGIC3Q9Y282 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 AC005332.7-201ENST00000614046 2005 ntBASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ERGIC3Q9Y282 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 SYT6-210ENST00000641643 1587 ntBASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 AC009237.3-201ENST00000393279 1427 ntBASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 AC125437.2-201ENST00000625180 2167 ntBASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERGIC3Q9Y282 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ERGIC3Q9Y282 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.33■□□□□ 0.53
ERGIC3Q9Y282 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.33■□□□□ 0.53
ERGIC3Q9Y282 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
ERGIC3Q9Y282 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
ERGIC3Q9Y282 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ERGIC3Q9Y282 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ERGIC3Q9Y282 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.33■□□□□ 0.53
ERGIC3Q9Y282 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ERGIC3Q9Y282 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.33■□□□□ 0.52
ERGIC3Q9Y282 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.33■□□□□ 0.52
ERGIC3Q9Y282 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ERGIC3Q9Y282 KRT16P3-201ENST00000439127 1283 ntBASIC18.33■□□□□ 0.52
ERGIC3Q9Y282 SLC47A1P1-202ENST00000449666 945 ntBASIC18.33■□□□□ 0.52
ERGIC3Q9Y282 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.33■□□□□ 0.52
ERGIC3Q9Y282 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERGIC3Q9Y282 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ERGIC3Q9Y282 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERGIC3Q9Y282 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERGIC3Q9Y282 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERGIC3Q9Y282 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
ERGIC3Q9Y282 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.32■□□□□ 0.52
ERGIC3Q9Y282 AC120498.9-201ENST00000339021 3867 ntBASIC18.31■□□□□ 0.52
ERGIC3Q9Y282 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERGIC3Q9Y282 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ERGIC3Q9Y282 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.31■□□□□ 0.52
ERGIC3Q9Y282 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERGIC3Q9Y282 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERGIC3Q9Y282 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.31■□□□□ 0.52
ERGIC3Q9Y282 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ERGIC3Q9Y282 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms