Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CDK11AQ9UQ88 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC31.34■■■□□ 2.61
CDK11AQ9UQ88 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC31.34■■■□□ 2.61
CDK11AQ9UQ88 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CDK11AQ9UQ88 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC31.34■■■□□ 2.61
CDK11AQ9UQ88 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
CDK11AQ9UQ88 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CDK11AQ9UQ88 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CDK11AQ9UQ88 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
CDK11AQ9UQ88 DECR2-212ENST00000627716 352 ntTSL 2 BASIC31.33■■■□□ 2.61
CDK11AQ9UQ88 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CDK11AQ9UQ88 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CDK11AQ9UQ88 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CDK11AQ9UQ88 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CDK11AQ9UQ88 NUDT16P1-203ENST00000513809 620 ntBASIC31.32■■■□□ 2.6
CDK11AQ9UQ88 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC31.32■■■□□ 2.6
CDK11AQ9UQ88 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CDK11AQ9UQ88 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC31.32■■■□□ 2.6
CDK11AQ9UQ88 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CDK11AQ9UQ88 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CDK11AQ9UQ88 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CDK11AQ9UQ88 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC31.31■■■□□ 2.6
CDK11AQ9UQ88 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CDK11AQ9UQ88 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CDK11AQ9UQ88 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CDK11AQ9UQ88 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC31.31■■■□□ 2.6
CDK11AQ9UQ88 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC31.31■■■□□ 2.6
CDK11AQ9UQ88 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC31.31■■■□□ 2.6
CDK11AQ9UQ88 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CDK11AQ9UQ88 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC31.31■■■□□ 2.6
CDK11AQ9UQ88 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CDK11AQ9UQ88 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC31.31■■■□□ 2.6
CDK11AQ9UQ88 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDK11AQ9UQ88 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CDK11AQ9UQ88 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC31.3■■■□□ 2.6
CDK11AQ9UQ88 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDK11AQ9UQ88 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
CDK11AQ9UQ88 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CDK11AQ9UQ88 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDK11AQ9UQ88 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC31.3■■■□□ 2.6
CDK11AQ9UQ88 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC31.3■■■□□ 2.6
CDK11AQ9UQ88 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CDK11AQ9UQ88 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC31.3■■■□□ 2.6
CDK11AQ9UQ88 LSR-203ENST00000360798 1963 ntTSL 2 BASIC31.3■■■□□ 2.6
CDK11AQ9UQ88 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 HLA-G-202ENST00000376815 851 ntBASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 HLA-G-203ENST00000376818 1127 ntBASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 TMPOP1-202ENST00000424642 1267 ntBASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 AC145285.6-201ENST00000604632 637 ntBASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDK11AQ9UQ88 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC31.28■■■□□ 2.6
CDK11AQ9UQ88 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CDK11AQ9UQ88 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CDK11AQ9UQ88 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
CDK11AQ9UQ88 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CDK11AQ9UQ88 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CDK11AQ9UQ88 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC31.28■■■□□ 2.6
CDK11AQ9UQ88 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC31.28■■■□□ 2.6
CDK11AQ9UQ88 RBM17P1-201ENST00000453646 1190 ntBASIC31.28■■■□□ 2.6
CDK11AQ9UQ88 AP002982.1-201ENST00000492365 877 ntBASIC31.28■■■□□ 2.6
CDK11AQ9UQ88 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC31.28■■■□□ 2.6
CDK11AQ9UQ88 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
CDK11AQ9UQ88 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CDK11AQ9UQ88 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC31.28■■■□□ 2.6
CDK11AQ9UQ88 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC31.27■■■□□ 2.6
CDK11AQ9UQ88 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDK11AQ9UQ88 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC31.27■■■□□ 2.6
CDK11AQ9UQ88 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
CDK11AQ9UQ88 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
CDK11AQ9UQ88 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
CDK11AQ9UQ88 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDK11AQ9UQ88 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CDK11AQ9UQ88 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC31.27■■■□□ 2.6
CDK11AQ9UQ88 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDK11AQ9UQ88 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC31.27■■■□□ 2.6
CDK11AQ9UQ88 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CDK11AQ9UQ88 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDK11AQ9UQ88 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDK11AQ9UQ88 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
CDK11AQ9UQ88 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC31.26■■■□□ 2.59
CDK11AQ9UQ88 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC31.26■■■□□ 2.59
CDK11AQ9UQ88 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
CDK11AQ9UQ88 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CDK11AQ9UQ88 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC31.26■■■□□ 2.59
CDK11AQ9UQ88 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDK11AQ9UQ88 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDK11AQ9UQ88 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms