Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 BX119927.1-201ENST00000636596 1552 ntBASIC21.32■■□□□ 1
PCDHGC3Q9UN70 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC3Q9UN70 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.31■■□□□ 1
PCDHGC3Q9UN70 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGC3Q9UN70 KRT8P17-201ENST00000453110 1448 ntBASIC21.3■■□□□ 1
PCDHGC3Q9UN70 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.3■■□□□ 1
PCDHGC3Q9UN70 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGC3Q9UN70 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
PCDHGC3Q9UN70 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGC3Q9UN70 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGC3Q9UN70 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
PCDHGC3Q9UN70 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
PCDHGC3Q9UN70 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.3■■□□□ 1
PCDHGC3Q9UN70 AL031963.3-201ENST00000606441 850 ntBASIC21.3■■□□□ 1
PCDHGC3Q9UN70 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.3■■□□□ 1
PCDHGC3Q9UN70 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGC3Q9UN70 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGC3Q9UN70 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGC3Q9UN70 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
PCDHGC3Q9UN70 AL391422.3-201ENST00000603791 2761 ntBASIC21.3■■□□□ 1
PCDHGC3Q9UN70 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 DUSP5P2-201ENST00000426873 1033 ntBASIC21.29■■□□□ 1
PCDHGC3Q9UN70 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 AC023632.3-201ENST00000521633 145 ntBASIC21.29■■□□□ 1
PCDHGC3Q9UN70 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 MIR4758-201ENST00000577688 71 ntBASIC21.29■■□□□ 1
PCDHGC3Q9UN70 AL109923.1-201ENST00000618799 583 ntBASIC21.29■■□□□ 1
PCDHGC3Q9UN70 TCF3P1-201ENST00000423021 1937 ntBASIC21.29■■□□□ 1
PCDHGC3Q9UN70 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGC3Q9UN70 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.28■■□□□ 1
PCDHGC3Q9UN70 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 AC091874.3-201ENST00000512672 1195 ntBASIC21.28■■□□□ 1
PCDHGC3Q9UN70 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms