Protein–RNA interactions for Protein: Q9UMS4

PRPF19, Pre-mRNA-processing factor 19, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19Q9UMS4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPF19Q9UMS4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.22■□□□□ 0.67
PRPF19Q9UMS4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PRPF19Q9UMS4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPF19Q9UMS4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRPF19Q9UMS4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPF19Q9UMS4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPF19Q9UMS4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPF19Q9UMS4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
PRPF19Q9UMS4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 NEFHP1-201ENST00000412845 2629 ntBASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 BX842568.3-201ENST00000418104 571 ntBASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF19Q9UMS4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 POU5F1P4-201ENST00000413175 1085 ntBASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.2■□□□□ 0.66
PRPF19Q9UMS4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 AC245052.3-201ENST00000450182 901 ntBASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 AC116050.2-201ENST00000612102 1779 ntBASIC19.19■□□□□ 0.66
PRPF19Q9UMS4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 AC008175.2-201ENST00000612840 297 ntBASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 AL138781.2-201ENST00000617896 1843 ntBASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF19Q9UMS4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF19Q9UMS4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF19Q9UMS4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF19Q9UMS4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.17■□□□□ 0.66
PRPF19Q9UMS4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.17■□□□□ 0.66
PRPF19Q9UMS4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.17■□□□□ 0.66
PRPF19Q9UMS4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF19Q9UMS4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF19Q9UMS4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.17■□□□□ 0.66
PRPF19Q9UMS4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
PRPF19Q9UMS4 IGHV3-19-201ENST00000521488 291 ntBASIC19.17■□□□□ 0.66
PRPF19Q9UMS4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms