Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CHRNA9Q9UGM1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA9Q9UGM1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA9Q9UGM1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.41■□□□□ 0.54
CHRNA9Q9UGM1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CHRNA9Q9UGM1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.41■□□□□ 0.54
CHRNA9Q9UGM1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA9Q9UGM1 AC010980.2-201ENST00000587099 1412 ntBASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 AC093787.1-201ENST00000450396 207 ntBASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 AF201337.1-201ENST00000520239 748 ntBASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA9Q9UGM1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
CHRNA9Q9UGM1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.39■□□□□ 0.54
CHRNA9Q9UGM1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.39■□□□□ 0.54
CHRNA9Q9UGM1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 AC105036.2-201ENST00000569468 176 ntBASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 CYP2T3P-201ENST00000601990 817 ntBASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 AC112907.3-201ENST00000577781 2400 ntBASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 PCDHAC2-203ENST00000615316 3011 ntBASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA9Q9UGM1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA9Q9UGM1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA9Q9UGM1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA9Q9UGM1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA9Q9UGM1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CHRNA9Q9UGM1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA9Q9UGM1 KRT18P68-201ENST00000392293 1000 ntBASIC18.38■□□□□ 0.53
CHRNA9Q9UGM1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA9Q9UGM1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CHRNA9Q9UGM1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA9Q9UGM1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CHRNA9Q9UGM1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA9Q9UGM1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.38■□□□□ 0.53
CHRNA9Q9UGM1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA9Q9UGM1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA9Q9UGM1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 AL121832.2-201ENST00000610979 668 ntBASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 MKRN4P-201ENST00000444706 1521 ntBASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 AFG3L1P-217ENST00000557444 2447 ntBASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRNA9Q9UGM1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms