Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.22■□□□□ 0.67
NIPSNAP3AQ9UFN0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NIPSNAP3AQ9UFN0 AC087289.5-201ENST00000586076 3175 ntBASIC19.22■□□□□ 0.67
NIPSNAP3AQ9UFN0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NIPSNAP3AQ9UFN0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NIPSNAP3AQ9UFN0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NIPSNAP3AQ9UFN0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NIPSNAP3AQ9UFN0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.22■□□□□ 0.67
NIPSNAP3AQ9UFN0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.22■□□□□ 0.67
NIPSNAP3AQ9UFN0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.22■□□□□ 0.67
NIPSNAP3AQ9UFN0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NIPSNAP3AQ9UFN0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.22■□□□□ 0.67
NIPSNAP3AQ9UFN0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NIPSNAP3AQ9UFN0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 SUDS3P1-201ENST00000505831 966 ntBASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 SLC7A5P2-201ENST00000553010 536 ntBASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 DUX4L2-201ENST00000561772 1275 ntBASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 DUX4L6-201ENST00000626483 1275 ntBASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 DUX4L1-201ENST00000627662 1275 ntBASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 DUX4L8-201ENST00000629013 1275 ntBASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 DUX4L3-201ENST00000630187 1275 ntBASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 DUX4L7-201ENST00000630678 1275 ntBASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 DUX4L5-201ENST00000630834 1275 ntBASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPSNAP3AQ9UFN0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.2■□□□□ 0.66
NIPSNAP3AQ9UFN0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPSNAP3AQ9UFN0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.2■□□□□ 0.66
NIPSNAP3AQ9UFN0 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.2■□□□□ 0.66
NIPSNAP3AQ9UFN0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.2■□□□□ 0.66
NIPSNAP3AQ9UFN0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPSNAP3AQ9UFN0 IRS3P-201ENST00000223076 1006 ntBASIC19.2■□□□□ 0.66
NIPSNAP3AQ9UFN0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NIPSNAP3AQ9UFN0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.2■□□□□ 0.66
NIPSNAP3AQ9UFN0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.2■□□□□ 0.66
NIPSNAP3AQ9UFN0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPSNAP3AQ9UFN0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPSNAP3AQ9UFN0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPSNAP3AQ9UFN0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NIPSNAP3AQ9UFN0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPSNAP3AQ9UFN0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPSNAP3AQ9UFN0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 AC142381.2-201ENST00000566120 298 ntBASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 AC104187.1-201ENST00000607510 612 ntBASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 DPP3P2-201ENST00000416030 1696 ntBASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.19■□□□□ 0.66
NIPSNAP3AQ9UFN0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NIPSNAP3AQ9UFN0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NIPSNAP3AQ9UFN0 AC116562.4-201ENST00000641316 2276 ntBASIC19.18■□□□□ 0.66
NIPSNAP3AQ9UFN0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NIPSNAP3AQ9UFN0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NIPSNAP3AQ9UFN0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NIPSNAP3AQ9UFN0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.18■□□□□ 0.66
NIPSNAP3AQ9UFN0 AP001160.3-201ENST00000601484 763 ntBASIC19.18■□□□□ 0.66
NIPSNAP3AQ9UFN0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NIPSNAP3AQ9UFN0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NIPSNAP3AQ9UFN0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.18■□□□□ 0.66
NIPSNAP3AQ9UFN0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NIPSNAP3AQ9UFN0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NIPSNAP3AQ9UFN0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NIPSNAP3AQ9UFN0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NIPSNAP3AQ9UFN0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NIPSNAP3AQ9UFN0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
NIPSNAP3AQ9UFN0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NIPSNAP3AQ9UFN0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms