Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTSFQ9UBX1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CTSFQ9UBX1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19■□□□□ 0.63
CTSFQ9UBX1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19■□□□□ 0.63
CTSFQ9UBX1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CTSFQ9UBX1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CTSFQ9UBX1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTSFQ9UBX1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19■□□□□ 0.63
CTSFQ9UBX1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19■□□□□ 0.63
CTSFQ9UBX1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CTSFQ9UBX1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.98■□□□□ 0.63
CTSFQ9UBX1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.97■□□□□ 0.63
CTSFQ9UBX1 C1QBPP2-201ENST00000528754 825 ntBASIC18.97■□□□□ 0.63
CTSFQ9UBX1 AC120498.8-201ENST00000614275 531 ntBASIC18.97■□□□□ 0.63
CTSFQ9UBX1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.97■□□□□ 0.63
CTSFQ9UBX1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 RN7SL471P-201ENST00000580476 299 ntBASIC18.96■□□□□ 0.63
CTSFQ9UBX1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 AL359736.2-201ENST00000621992 437 ntBASIC18.96■□□□□ 0.63
CTSFQ9UBX1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTSFQ9UBX1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTSFQ9UBX1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.95■□□□□ 0.62
CTSFQ9UBX1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTSFQ9UBX1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CTSFQ9UBX1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTSFQ9UBX1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CTSFQ9UBX1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.95■□□□□ 0.62
CTSFQ9UBX1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.95■□□□□ 0.62
CTSFQ9UBX1 RPPH1-201ENST00000516869 333 ntBASIC18.95■□□□□ 0.62
CTSFQ9UBX1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.95■□□□□ 0.62
CTSFQ9UBX1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.95■□□□□ 0.62
CTSFQ9UBX1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.95■□□□□ 0.62
CTSFQ9UBX1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTSFQ9UBX1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTSFQ9UBX1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTSFQ9UBX1 AC007225.1-201ENST00000566331 1836 ntBASIC18.95■□□□□ 0.62
CTSFQ9UBX1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms