Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 POU5F1P3-201ENST00000428824 1078 ntBASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 SOX15-203ENST00000570788 1093 ntBASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 AC008403.3-201ENST00000598924 454 ntBASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 AC006557.6-201ENST00000623071 864 ntBASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 AC005829.2-201ENST00000571422 1056 ntBASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPHK1Q9NYA1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 FAM201B-201ENST00000458407 597 ntBASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 AC026366.1-201ENST00000488803 879 ntBASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 UNC93B4-201ENST00000505679 747 ntBASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 AP003097.1-201ENST00000530657 1135 ntBASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHK1Q9NYA1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 FEM1AP1-201ENST00000431297 1995 ntBASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 SMG8-203ENST00000578922 2178 ntBASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHK1Q9NYA1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 AC023632.3-201ENST00000521633 145 ntBASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 AC020907.5-201ENST00000624372 1936 ntBASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms