Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 SMG8-203ENST00000578922 2178 ntBASIC18.77■□□□□ 0.6
RLIMQ9NVW2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.77■□□□□ 0.6
RLIMQ9NVW2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.77■□□□□ 0.6
RLIMQ9NVW2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RLIMQ9NVW2 AC010536.3-201ENST00000620306 533 ntBASIC18.77■□□□□ 0.6
RLIMQ9NVW2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RLIMQ9NVW2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RLIMQ9NVW2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
RLIMQ9NVW2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RLIMQ9NVW2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RLIMQ9NVW2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RLIMQ9NVW2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.76■□□□□ 0.59
RLIMQ9NVW2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 RARRES2P6-201ENST00000567333 442 ntBASIC18.76■□□□□ 0.59
RLIMQ9NVW2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RLIMQ9NVW2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.75■□□□□ 0.59
RLIMQ9NVW2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RLIMQ9NVW2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RLIMQ9NVW2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RLIMQ9NVW2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RLIMQ9NVW2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RLIMQ9NVW2 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.75■□□□□ 0.59
RLIMQ9NVW2 TERF1P5-201ENST00000477545 1207 ntBASIC18.75■□□□□ 0.59
RLIMQ9NVW2 AC137761.2-201ENST00000561729 223 ntBASIC18.75■□□□□ 0.59
RLIMQ9NVW2 AC145350.3-201ENST00000569033 163 ntBASIC18.75■□□□□ 0.59
RLIMQ9NVW2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RLIMQ9NVW2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.75■□□□□ 0.59
RLIMQ9NVW2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RLIMQ9NVW2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RLIMQ9NVW2 AC116562.4-201ENST00000641316 2276 ntBASIC18.75■□□□□ 0.59
RLIMQ9NVW2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RLIMQ9NVW2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.75■□□□□ 0.59
RLIMQ9NVW2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 CDV3P1-201ENST00000471403 739 ntBASIC18.74■□□□□ 0.59
RLIMQ9NVW2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RLIMQ9NVW2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 AL158211.5-201ENST00000623583 2518 ntBASIC18.73■□□□□ 0.59
RLIMQ9NVW2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.73■□□□□ 0.59
RLIMQ9NVW2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms