Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.02■□□□□ 0.64
NEUROD4Q9HD90 TCF3P1-201ENST00000423021 1937 ntBASIC19.02■□□□□ 0.64
NEUROD4Q9HD90 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEUROD4Q9HD90 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEUROD4Q9HD90 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NEUROD4Q9HD90 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.02■□□□□ 0.64
NEUROD4Q9HD90 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEUROD4Q9HD90 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.02■□□□□ 0.64
NEUROD4Q9HD90 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.02■□□□□ 0.64
NEUROD4Q9HD90 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.02■□□□□ 0.64
NEUROD4Q9HD90 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NEUROD4Q9HD90 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEUROD4Q9HD90 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEUROD4Q9HD90 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.02■□□□□ 0.63
NEUROD4Q9HD90 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NEUROD4Q9HD90 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.02■□□□□ 0.63
NEUROD4Q9HD90 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.02■□□□□ 0.63
NEUROD4Q9HD90 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NEUROD4Q9HD90 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NEUROD4Q9HD90 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NEUROD4Q9HD90 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
NEUROD4Q9HD90 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NEUROD4Q9HD90 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 AC138932.1-201ENST00000534164 6830 ntBASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.01■□□□□ 0.63
NEUROD4Q9HD90 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NEUROD4Q9HD90 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19■□□□□ 0.63
NEUROD4Q9HD90 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEUROD4Q9HD90 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19■□□□□ 0.63
NEUROD4Q9HD90 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19■□□□□ 0.63
NEUROD4Q9HD90 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19■□□□□ 0.63
NEUROD4Q9HD90 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEUROD4Q9HD90 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19■□□□□ 0.63
NEUROD4Q9HD90 AC100791.3-201ENST00000617619 330 ntBASIC19■□□□□ 0.63
NEUROD4Q9HD90 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NEUROD4Q9HD90 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NEUROD4Q9HD90 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEUROD4Q9HD90 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NEUROD4Q9HD90 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19■□□□□ 0.63
NEUROD4Q9HD90 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19■□□□□ 0.63
NEUROD4Q9HD90 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEUROD4Q9HD90 AIRN-201ENST00000601203 4374 ntBASIC19■□□□□ 0.63
NEUROD4Q9HD90 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEUROD4Q9HD90 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEUROD4Q9HD90 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEUROD4Q9HD90 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NEUROD4Q9HD90 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
NEUROD4Q9HD90 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEUROD4Q9HD90 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 PCDHAC2-203ENST00000615316 3011 ntBASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 AC006015.1-201ENST00000429970 570 ntBASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 AC016405.3-201ENST00000607710 860 ntBASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEUROD4Q9HD90 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 RARRES2P4-201ENST00000514074 484 ntBASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEUROD4Q9HD90 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms