Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC29.92■■■□□ 2.38
SCAF1Q9H7N4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC29.92■■■□□ 2.38
SCAF1Q9H7N4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
SCAF1Q9H7N4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 LSM12P1-201ENST00000411836 588 ntBASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 TSPY15P-201ENST00000457163 923 ntBASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC29.91■■■□□ 2.38
SCAF1Q9H7N4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
SCAF1Q9H7N4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
SCAF1Q9H7N4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC29.9■■■□□ 2.38
SCAF1Q9H7N4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
SCAF1Q9H7N4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC29.9■■■□□ 2.38
SCAF1Q9H7N4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC29.9■■■□□ 2.38
SCAF1Q9H7N4 AL049597.2-201ENST00000565575 961 ntBASIC29.9■■■□□ 2.38
SCAF1Q9H7N4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC29.9■■■□□ 2.38
SCAF1Q9H7N4 AC233263.1-201ENST00000578059 224 ntBASIC29.9■■■□□ 2.38
SCAF1Q9H7N4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SCAF1Q9H7N4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC29.89■■■□□ 2.38
SCAF1Q9H7N4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SCAF1Q9H7N4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
SCAF1Q9H7N4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.38
SCAF1Q9H7N4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
SCAF1Q9H7N4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
SCAF1Q9H7N4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SCAF1Q9H7N4 AC097493.4-201ENST00000641197 219 ntBASIC29.89■■■□□ 2.38
SCAF1Q9H7N4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC29.89■■■□□ 2.38
SCAF1Q9H7N4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SCAF1Q9H7N4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
SCAF1Q9H7N4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC29.88■■■□□ 2.37
SCAF1Q9H7N4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC29.88■■■□□ 2.37
SCAF1Q9H7N4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SCAF1Q9H7N4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC29.88■■■□□ 2.37
SCAF1Q9H7N4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
SCAF1Q9H7N4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
SCAF1Q9H7N4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC29.88■■■□□ 2.37
SCAF1Q9H7N4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SCAF1Q9H7N4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC29.87■■■□□ 2.37
SCAF1Q9H7N4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC29.87■■■□□ 2.37
SCAF1Q9H7N4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
SCAF1Q9H7N4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC29.87■■■□□ 2.37
SCAF1Q9H7N4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC29.87■■■□□ 2.37
SCAF1Q9H7N4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
SCAF1Q9H7N4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
SCAF1Q9H7N4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
SCAF1Q9H7N4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SCAF1Q9H7N4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC29.87■■■□□ 2.37
SCAF1Q9H7N4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC29.87■■■□□ 2.37
SCAF1Q9H7N4 CD177P1-201ENST00000606252 935 ntBASIC29.87■■■□□ 2.37
SCAF1Q9H7N4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC29.87■■■□□ 2.37
SCAF1Q9H7N4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC29.87■■■□□ 2.37
SCAF1Q9H7N4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SCAF1Q9H7N4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 AL590326.2-201ENST00000625139 305 ntBASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 PCDHAC2-203ENST00000615316 3011 ntBASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 AC055733.4-201ENST00000638462 1354 ntBASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC29.86■■■□□ 2.37
SCAF1Q9H7N4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SCAF1Q9H7N4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
SCAF1Q9H7N4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC29.85■■■□□ 2.37
SCAF1Q9H7N4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC29.85■■■□□ 2.37
SCAF1Q9H7N4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC29.85■■■□□ 2.37
SCAF1Q9H7N4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC29.85■■■□□ 2.37
SCAF1Q9H7N4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SCAF1Q9H7N4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
SCAF1Q9H7N4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SCAF1Q9H7N4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC29.84■■■□□ 2.37
SCAF1Q9H7N4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms