Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 MTDHP1-201ENST00000605323 784 ntBASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 Z99916.2-201ENST00000604037 246 ntBASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 AL023875.1-201ENST00000640777 796 ntBASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATXN3LQ9H3M9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3LQ9H3M9 AC027702.1-201ENST00000563810 1770 ntBASIC21.18■□□□□ 0.98
ATXN3LQ9H3M9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3LQ9H3M9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3LQ9H3M9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3LQ9H3M9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.18■□□□□ 0.98
ATXN3LQ9H3M9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
ATXN3LQ9H3M9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ATXN3LQ9H3M9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3LQ9H3M9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.18■□□□□ 0.98
ATXN3LQ9H3M9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.18■□□□□ 0.98
ATXN3LQ9H3M9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.18■□□□□ 0.98
ATXN3LQ9H3M9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.18■□□□□ 0.98
ATXN3LQ9H3M9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.18■□□□□ 0.98
ATXN3LQ9H3M9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3LQ9H3M9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATXN3LQ9H3M9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATXN3LQ9H3M9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 AC239809.2-201ENST00000415381 517 ntBASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.16■□□□□ 0.98
ATXN3LQ9H3M9 AL049796.1-201ENST00000565336 1766 ntBASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms