Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
LHX5Q9H2C1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.31■■□□□ 1
LHX5Q9H2C1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.31■■□□□ 1
LHX5Q9H2C1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
LHX5Q9H2C1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LHX5Q9H2C1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
LHX5Q9H2C1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LHX5Q9H2C1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
LHX5Q9H2C1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
LHX5Q9H2C1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LHX5Q9H2C1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LHX5Q9H2C1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LHX5Q9H2C1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LHX5Q9H2C1 ABHD17AP1-201ENST00000358206 933 ntBASIC21.3■■□□□ 1
LHX5Q9H2C1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.3■■□□□ 1
LHX5Q9H2C1 CD99P1-205ENST00000527459 561 ntBASIC21.3■■□□□ 1
LHX5Q9H2C1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.3■■□□□ 1
LHX5Q9H2C1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.3■■□□□ 1
LHX5Q9H2C1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.3■■□□□ 1
LHX5Q9H2C1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.3■■□□□ 1
LHX5Q9H2C1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.3■■□□□ 1
LHX5Q9H2C1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
LHX5Q9H2C1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.3■■□□□ 1
LHX5Q9H2C1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LHX5Q9H2C1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LHX5Q9H2C1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.3■■□□□ 1
LHX5Q9H2C1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LHX5Q9H2C1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LHX5Q9H2C1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LHX5Q9H2C1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LHX5Q9H2C1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.29■■□□□ 1
LHX5Q9H2C1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LHX5Q9H2C1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.29■■□□□ 1
LHX5Q9H2C1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.29■■□□□ 1
LHX5Q9H2C1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.29■■□□□ 1
LHX5Q9H2C1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.29■■□□□ 1
LHX5Q9H2C1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.29■■□□□ 1
LHX5Q9H2C1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.29■■□□□ 1
LHX5Q9H2C1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LHX5Q9H2C1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.29■■□□□ 1
LHX5Q9H2C1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LHX5Q9H2C1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.29■■□□□ 1
LHX5Q9H2C1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.29■■□□□ 1
LHX5Q9H2C1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
LHX5Q9H2C1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
LHX5Q9H2C1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LHX5Q9H2C1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LHX5Q9H2C1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LHX5Q9H2C1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.28■■□□□ 1
LHX5Q9H2C1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 MIR4758-201ENST00000577688 71 ntBASIC21.28■■□□□ 1
LHX5Q9H2C1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 KRT8P17-201ENST00000453110 1448 ntBASIC21.28■■□□□ 1
LHX5Q9H2C1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
LHX5Q9H2C1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LHX5Q9H2C1 BX119927.1-201ENST00000636596 1552 ntBASIC21.27■■□□□ 1
LHX5Q9H2C1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.27■■□□□ 1
LHX5Q9H2C1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LHX5Q9H2C1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
LHX5Q9H2C1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.27■■□□□ 1
LHX5Q9H2C1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LHX5Q9H2C1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.27■■□□□ 1
LHX5Q9H2C1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.27■■□□□ 1
LHX5Q9H2C1 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.27■■□□□ 1
LHX5Q9H2C1 AC023632.3-201ENST00000521633 145 ntBASIC21.27■■□□□ 1
LHX5Q9H2C1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LHX5Q9H2C1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.27■■□□□ 1
LHX5Q9H2C1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.27■■□□□ 1
LHX5Q9H2C1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.27■■□□□ 1
LHX5Q9H2C1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.27■■□□□ 1
LHX5Q9H2C1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.27■■□□□ 1
LHX5Q9H2C1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.27■■□□□ 1
LHX5Q9H2C1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LHX5Q9H2C1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
LHX5Q9H2C1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LHX5Q9H2C1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.27■□□□□ 0.99
LHX5Q9H2C1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LHX5Q9H2C1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LHX5Q9H2C1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
LHX5Q9H2C1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LHX5Q9H2C1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LHX5Q9H2C1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LHX5Q9H2C1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
LHX5Q9H2C1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LHX5Q9H2C1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LHX5Q9H2C1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms