Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 BX323043.1-201ENST00000641006 1765 ntBASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 MFSD11-216ENST00000590393 1141 ntBASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXP3Q9BZS1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.77■□□□□ 0.92
FOXP3Q9BZS1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FOXP3Q9BZS1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXP3Q9BZS1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXP3Q9BZS1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.77■□□□□ 0.92
FOXP3Q9BZS1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXP3Q9BZS1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXP3Q9BZS1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXP3Q9BZS1 NCF1B-203ENST00000435988 1254 ntBASIC20.77■□□□□ 0.92
FOXP3Q9BZS1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.77■□□□□ 0.92
FOXP3Q9BZS1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXP3Q9BZS1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXP3Q9BZS1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
FOXP3Q9BZS1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXP3Q9BZS1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXP3Q9BZS1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FOXP3Q9BZS1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.77■□□□□ 0.91
FOXP3Q9BZS1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.77■□□□□ 0.91
FOXP3Q9BZS1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
FOXP3Q9BZS1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXP3Q9BZS1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXP3Q9BZS1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXP3Q9BZS1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
FOXP3Q9BZS1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
FOXP3Q9BZS1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
FOXP3Q9BZS1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.74■□□□□ 0.91
FOXP3Q9BZS1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
FOXP3Q9BZS1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXP3Q9BZS1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXP3Q9BZS1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.74■□□□□ 0.91
FOXP3Q9BZS1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXP3Q9BZS1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.74■□□□□ 0.91
FOXP3Q9BZS1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXP3Q9BZS1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 GPX1P1-201ENST00000388829 606 ntBASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 TMEM179-206ENST00000616017 1645 ntBASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms