Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.22■□□□□ 0.67
THUMPD3Q9BV44 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD3Q9BV44 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.22■□□□□ 0.67
THUMPD3Q9BV44 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD3Q9BV44 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
THUMPD3Q9BV44 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD3Q9BV44 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD3Q9BV44 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD3Q9BV44 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD3Q9BV44 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
THUMPD3Q9BV44 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
THUMPD3Q9BV44 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THUMPD3Q9BV44 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms