Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
ABCA3Q99758 LGALS8-AS1-201ENST00000487567 1457 ntBASIC27.13■■□□□ 1.93
ABCA3Q99758 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ABCA3Q99758 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC27.13■■□□□ 1.93
ABCA3Q99758 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ABCA3Q99758 CR392000.1-201ENST00000624770 1228 ntBASIC27.13■■□□□ 1.93
ABCA3Q99758 C1orf229-201ENST00000623686 2258 ntBASIC27.13■■□□□ 1.93
ABCA3Q99758 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ABCA3Q99758 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
ABCA3Q99758 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ABCA3Q99758 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
ABCA3Q99758 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ABCA3Q99758 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ABCA3Q99758 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ABCA3Q99758 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC27.13■■□□□ 1.93
ABCA3Q99758 ECEL1P2-202ENST00000465689 757 ntBASIC27.13■■□□□ 1.93
ABCA3Q99758 AC063952.2-201ENST00000498792 1227 ntBASIC27.13■■□□□ 1.93
ABCA3Q99758 CLN6-221ENST00000637494 765 ntTSL 5 BASIC27.13■■□□□ 1.93
ABCA3Q99758 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ABCA3Q99758 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC27.12■■□□□ 1.93
ABCA3Q99758 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
ABCA3Q99758 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
ABCA3Q99758 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
ABCA3Q99758 AP005242.2-201ENST00000580065 1175 ntBASIC27.12■■□□□ 1.93
ABCA3Q99758 AL358472.4-201ENST00000633140 710 ntBASIC27.12■■□□□ 1.93
ABCA3Q99758 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
ABCA3Q99758 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
ABCA3Q99758 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC27.11■■□□□ 1.93
ABCA3Q99758 GUK1-204ENST00000366721 689 ntTSL 3 BASIC27.11■■□□□ 1.93
ABCA3Q99758 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC27.11■■□□□ 1.93
ABCA3Q99758 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
ABCA3Q99758 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
ABCA3Q99758 KRT8P36-201ENST00000489121 1440 ntBASIC27.11■■□□□ 1.93
ABCA3Q99758 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
ABCA3Q99758 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
ABCA3Q99758 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
ABCA3Q99758 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
ABCA3Q99758 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
ABCA3Q99758 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC27.1■■□□□ 1.93
ABCA3Q99758 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC27.1■■□□□ 1.93
ABCA3Q99758 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
ABCA3Q99758 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
ABCA3Q99758 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
ABCA3Q99758 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
ABCA3Q99758 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
ABCA3Q99758 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
ABCA3Q99758 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
ABCA3Q99758 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
ABCA3Q99758 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC27.1■■□□□ 1.93
ABCA3Q99758 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
ABCA3Q99758 DUSP5P1-201ENST00000441325 1139 ntBASIC27.1■■□□□ 1.93
ABCA3Q99758 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC27.1■■□□□ 1.93
ABCA3Q99758 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC27.1■■□□□ 1.93
ABCA3Q99758 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC27.1■■□□□ 1.93
ABCA3Q99758 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
ABCA3Q99758 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA3Q99758 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC27.09■■□□□ 1.93
ABCA3Q99758 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA3Q99758 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA3Q99758 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC27.09■■□□□ 1.93
ABCA3Q99758 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA3Q99758 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA3Q99758 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA3Q99758 ISCU-203ENST00000431221 799 ntTSL 2 BASIC27.09■■□□□ 1.93
ABCA3Q99758 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA3Q99758 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC27.09■■□□□ 1.93
ABCA3Q99758 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA3Q99758 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA3Q99758 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC27.09■■□□□ 1.93
ABCA3Q99758 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
ABCA3Q99758 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
ABCA3Q99758 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
ABCA3Q99758 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
ABCA3Q99758 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC27.08■■□□□ 1.93
ABCA3Q99758 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC27.08■■□□□ 1.93
ABCA3Q99758 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC27.08■■□□□ 1.93
ABCA3Q99758 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ABCA3Q99758 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC27.08■■□□□ 1.93
ABCA3Q99758 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
ABCA3Q99758 B3GAT3P1-201ENST00000471720 806 ntBASIC27.07■■□□□ 1.92
ABCA3Q99758 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ABCA3Q99758 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC27.07■■□□□ 1.92
ABCA3Q99758 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC27.07■■□□□ 1.92
ABCA3Q99758 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
ABCA3Q99758 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC27.07■■□□□ 1.92
ABCA3Q99758 AK4P3-201ENST00000418260 669 ntBASIC27.07■■□□□ 1.92
ABCA3Q99758 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
ABCA3Q99758 AL031985.4-201ENST00000642138 673 ntBASIC27.07■■□□□ 1.92
ABCA3Q99758 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
ABCA3Q99758 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC27.07■■□□□ 1.92
ABCA3Q99758 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ABCA3Q99758 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
ABCA3Q99758 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ABCA3Q99758 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ABCA3Q99758 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC27.06■■□□□ 1.92
ABCA3Q99758 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC27.06■■□□□ 1.92
ABCA3Q99758 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ABCA3Q99758 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
ABCA3Q99758 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
ABCA3Q99758 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms