Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCL13Q99616 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL13Q99616 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL13Q99616 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.89■□□□□ 0.29
CCL13Q99616 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL13Q99616 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL13Q99616 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.89■□□□□ 0.29
CCL13Q99616 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL13Q99616 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCL13Q99616 AC020907.5-201ENST00000624372 1936 ntBASIC16.89■□□□□ 0.29
CCL13Q99616 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL13Q99616 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL13Q99616 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL13Q99616 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL13Q99616 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL13Q99616 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCL13Q99616 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL13Q99616 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL13Q99616 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCL13Q99616 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CCL13Q99616 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL13Q99616 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCL13Q99616 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL13Q99616 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL13Q99616 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCL13Q99616 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL13Q99616 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL13Q99616 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL13Q99616 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL13Q99616 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.88■□□□□ 0.29
CCL13Q99616 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL13Q99616 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL13Q99616 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.88■□□□□ 0.29
CCL13Q99616 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCL13Q99616 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL13Q99616 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL13Q99616 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL13Q99616 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CCL13Q99616 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL13Q99616 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL13Q99616 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL13Q99616 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL13Q99616 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCL13Q99616 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL13Q99616 DPP3P2-201ENST00000416030 1696 ntBASIC16.88■□□□□ 0.29
CCL13Q99616 AP005212.1-201ENST00000581547 1997 ntBASIC16.88■□□□□ 0.29
CCL13Q99616 LINC01006-201ENST00000333319 2292 ntBASIC16.87■□□□□ 0.29
CCL13Q99616 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL13Q99616 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.87■□□□□ 0.29
CCL13Q99616 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL13Q99616 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.87■□□□□ 0.29
CCL13Q99616 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL13Q99616 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL13Q99616 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL13Q99616 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL13Q99616 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL13Q99616 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL13Q99616 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.87■□□□□ 0.29
CCL13Q99616 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.87■□□□□ 0.29
CCL13Q99616 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL13Q99616 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL13Q99616 AC073210.2-201ENST00000430369 194 ntBASIC16.87■□□□□ 0.29
CCL13Q99616 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL13Q99616 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCL13Q99616 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.87■□□□□ 0.29
CCL13Q99616 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL13Q99616 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.87■□□□□ 0.29
CCL13Q99616 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL13Q99616 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL13Q99616 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL13Q99616 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.87■□□□□ 0.29
CCL13Q99616 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL13Q99616 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL13Q99616 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL13Q99616 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL13Q99616 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL13Q99616 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL13Q99616 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL13Q99616 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL13Q99616 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL13Q99616 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL13Q99616 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL13Q99616 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL13Q99616 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.86■□□□□ 0.29
CCL13Q99616 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCL13Q99616 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.86■□□□□ 0.29
CCL13Q99616 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.86■□□□□ 0.29
CCL13Q99616 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CCL13Q99616 MYC-209ENST00000641252 345 ntBASIC16.86■□□□□ 0.29
CCL13Q99616 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL13Q99616 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL13Q99616 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL13Q99616 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL13Q99616 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CCL13Q99616 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL13Q99616 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL13Q99616 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL13Q99616 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCL13Q99616 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL13Q99616 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms