Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC110285.5-201ENST00000611501 352 ntBASIC18.33■□□□□ 0.52
SPENQ96T58 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.33■□□□□ 0.52
SPENQ96T58 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.33■□□□□ 0.52
SPENQ96T58 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPENQ96T58 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPENQ96T58 MYC-208ENST00000641036 567 ntBASIC18.33■□□□□ 0.52
SPENQ96T58 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPENQ96T58 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.32■□□□□ 0.52
SPENQ96T58 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPENQ96T58 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.32■□□□□ 0.52
SPENQ96T58 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPENQ96T58 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SPENQ96T58 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.32■□□□□ 0.52
SPENQ96T58 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.32■□□□□ 0.52
SPENQ96T58 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPENQ96T58 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SPENQ96T58 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.32■□□□□ 0.52
SPENQ96T58 HTR7P1-201ENST00000538670 1336 ntBASIC18.32■□□□□ 0.52
SPENQ96T58 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPENQ96T58 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.32■□□□□ 0.52
SPENQ96T58 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPENQ96T58 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPENQ96T58 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPENQ96T58 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPENQ96T58 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.31■□□□□ 0.52
SPENQ96T58 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.31■□□□□ 0.52
SPENQ96T58 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPENQ96T58 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.31■□□□□ 0.52
SPENQ96T58 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.31■□□□□ 0.52
SPENQ96T58 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPENQ96T58 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPENQ96T58 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPENQ96T58 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SPENQ96T58 FAM197Y1-201ENST00000421178 764 ntBASIC18.31■□□□□ 0.52
SPENQ96T58 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPENQ96T58 AL024507.2-201ENST00000606070 2574 ntBASIC18.31■□□□□ 0.52
SPENQ96T58 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPENQ96T58 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.31■□□□□ 0.52
SPENQ96T58 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPENQ96T58 AL353807.1-201ENST00000427475 662 ntBASIC18.3■□□□□ 0.52
SPENQ96T58 SLC25A3P1-201ENST00000443844 931 ntBASIC18.3■□□□□ 0.52
SPENQ96T58 KRT16P5-201ENST00000455284 522 ntBASIC18.3■□□□□ 0.52
SPENQ96T58 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPENQ96T58 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPENQ96T58 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SPENQ96T58 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPENQ96T58 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPENQ96T58 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPENQ96T58 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.3■□□□□ 0.52
SPENQ96T58 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPENQ96T58 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPENQ96T58 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPENQ96T58 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPENQ96T58 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.3■□□□□ 0.52
SPENQ96T58 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.3■□□□□ 0.52
SPENQ96T58 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.3■□□□□ 0.52
SPENQ96T58 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPENQ96T58 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.3■□□□□ 0.52
SPENQ96T58 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.3■□□□□ 0.52
SPENQ96T58 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPENQ96T58 NTF6B-201ENST00000591913 560 ntBASIC18.3■□□□□ 0.52
SPENQ96T58 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPENQ96T58 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.29■□□□□ 0.52
SPENQ96T58 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.29■□□□□ 0.52
SPENQ96T58 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.29■□□□□ 0.52
SPENQ96T58 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPENQ96T58 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPENQ96T58 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPENQ96T58 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SPENQ96T58 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.29■□□□□ 0.52
SPENQ96T58 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPENQ96T58 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.29■□□□□ 0.52
SPENQ96T58 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.29■□□□□ 0.52
SPENQ96T58 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SPENQ96T58 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.29■□□□□ 0.52
SPENQ96T58 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SPENQ96T58 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPENQ96T58 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPENQ96T58 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.28■□□□□ 0.52
SPENQ96T58 CRYGFP-201ENST00000418459 633 ntBASIC18.28■□□□□ 0.52
SPENQ96T58 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.28■□□□□ 0.52
SPENQ96T58 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.28■□□□□ 0.52
SPENQ96T58 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.28■□□□□ 0.52
SPENQ96T58 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPENQ96T58 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SPENQ96T58 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPENQ96T58 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPENQ96T58 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPENQ96T58 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPENQ96T58 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.28■□□□□ 0.52
SPENQ96T58 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SPENQ96T58 AL356652.1-201ENST00000615962 565 ntBASIC18.28■□□□□ 0.52
SPENQ96T58 AF106564.1-201ENST00000607058 2553 ntBASIC18.28■□□□□ 0.52
SPENQ96T58 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPENQ96T58 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPENQ96T58 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SPENQ96T58 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPENQ96T58 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPENQ96T58 AL590326.2-201ENST00000625139 305 ntBASIC18.28■□□□□ 0.52
SPENQ96T58 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms