Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 AC012306.2-201ENST00000609350 630 ntBASIC21.54■■□□□ 1.04
ZNF558Q96NG5 Z98882.1-201ENST00000622160 2253 ntBASIC21.54■■□□□ 1.04
ZNF558Q96NG5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 FAM197Y1-201ENST00000421178 764 ntBASIC21.53■■□□□ 1.04
ZNF558Q96NG5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF558Q96NG5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF558Q96NG5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ZNF558Q96NG5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.52■■□□□ 1.04
ZNF558Q96NG5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF558Q96NG5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF558Q96NG5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.52■■□□□ 1.04
ZNF558Q96NG5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.52■■□□□ 1.04
ZNF558Q96NG5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF558Q96NG5 AC073195.1-201ENST00000607241 877 ntBASIC21.52■■□□□ 1.04
ZNF558Q96NG5 AC004264.1-201ENST00000608354 794 ntBASIC21.52■■□□□ 1.04
ZNF558Q96NG5 AL353708.3-201ENST00000610272 989 ntBASIC21.52■■□□□ 1.04
ZNF558Q96NG5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.52■■□□□ 1.04
ZNF558Q96NG5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.52■■□□□ 1.04
ZNF558Q96NG5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF558Q96NG5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF558Q96NG5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF558Q96NG5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.52■■□□□ 1.04
ZNF558Q96NG5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.03
ZNF558Q96NG5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.52■■□□□ 1.03
ZNF558Q96NG5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ZNF558Q96NG5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
ZNF558Q96NG5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.51■■□□□ 1.03
ZNF558Q96NG5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF558Q96NG5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF558Q96NG5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
ZNF558Q96NG5 HLA-G-202ENST00000376815 851 ntBASIC21.51■■□□□ 1.03
ZNF558Q96NG5 HLA-G-203ENST00000376818 1127 ntBASIC21.51■■□□□ 1.03
ZNF558Q96NG5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
ZNF558Q96NG5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF558Q96NG5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF558Q96NG5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
ZNF558Q96NG5 AC121338.2-201ENST00000622535 1744 ntBASIC21.51■■□□□ 1.03
ZNF558Q96NG5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF558Q96NG5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF558Q96NG5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 MMP23A-201ENST00000234610 1017 ntBASIC21.5■■□□□ 1.03
ZNF558Q96NG5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ZNF558Q96NG5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF558Q96NG5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF558Q96NG5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF558Q96NG5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF558Q96NG5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.49■■□□□ 1.03
ZNF558Q96NG5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF558Q96NG5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF558Q96NG5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ZNF558Q96NG5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.49■■□□□ 1.03
ZNF558Q96NG5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.49■■□□□ 1.03
ZNF558Q96NG5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.49■■□□□ 1.03
ZNF558Q96NG5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF558Q96NG5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF558Q96NG5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF558Q96NG5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF558Q96NG5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF558Q96NG5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms