Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.29■■□□□ 1
CALR3Q96L12 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CALR3Q96L12 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CALR3Q96L12 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.29■■□□□ 1
CALR3Q96L12 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CALR3Q96L12 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CALR3Q96L12 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.29■■□□□ 1
CALR3Q96L12 AC125437.2-201ENST00000625180 2167 ntBASIC21.29■■□□□ 1
CALR3Q96L12 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.29■■□□□ 1
CALR3Q96L12 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CALR3Q96L12 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CALR3Q96L12 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
CALR3Q96L12 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CALR3Q96L12 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CALR3Q96L12 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.29■■□□□ 1
CALR3Q96L12 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.29■■□□□ 1
CALR3Q96L12 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.29■■□□□ 1
CALR3Q96L12 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.29■■□□□ 1
CALR3Q96L12 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CALR3Q96L12 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CALR3Q96L12 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.29■■□□□ 1
CALR3Q96L12 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.29■■□□□ 1
CALR3Q96L12 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CALR3Q96L12 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.29■■□□□ 1
CALR3Q96L12 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.29■■□□□ 1
CALR3Q96L12 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.28■■□□□ 1
CALR3Q96L12 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CALR3Q96L12 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.28■■□□□ 1
CALR3Q96L12 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.28■■□□□ 1
CALR3Q96L12 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.28■■□□□ 1
CALR3Q96L12 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CALR3Q96L12 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.28■■□□□ 1
CALR3Q96L12 AL356652.1-201ENST00000615962 565 ntBASIC21.28■■□□□ 1
CALR3Q96L12 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.28■■□□□ 1
CALR3Q96L12 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.28■■□□□ 1
CALR3Q96L12 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CALR3Q96L12 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CALR3Q96L12 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CALR3Q96L12 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CALR3Q96L12 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CALR3Q96L12 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.27■■□□□ 1
CALR3Q96L12 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.27■■□□□ 1
CALR3Q96L12 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CALR3Q96L12 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CALR3Q96L12 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.27■■□□□ 1
CALR3Q96L12 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CALR3Q96L12 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
CALR3Q96L12 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CALR3Q96L12 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.27■■□□□ 1
CALR3Q96L12 MIR638-201ENST00000385237 100 ntBASIC21.27■■□□□ 1
CALR3Q96L12 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.27■■□□□ 1
CALR3Q96L12 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.27■■□□□ 1
CALR3Q96L12 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.27■■□□□ 1
CALR3Q96L12 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.27■■□□□ 1
CALR3Q96L12 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.27■■□□□ 1
CALR3Q96L12 AC018445.3-201ENST00000624177 1945 ntBASIC21.27■■□□□ 1
CALR3Q96L12 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CALR3Q96L12 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.27■■□□□ 1
CALR3Q96L12 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CALR3Q96L12 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CALR3Q96L12 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
CALR3Q96L12 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CALR3Q96L12 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CALR3Q96L12 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CALR3Q96L12 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.27■□□□□ 0.99
CALR3Q96L12 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.27■□□□□ 0.99
CALR3Q96L12 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CALR3Q96L12 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.26■□□□□ 0.99
CALR3Q96L12 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CALR3Q96L12 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALR3Q96L12 AC116562.4-201ENST00000641316 2276 ntBASIC21.26■□□□□ 0.99
CALR3Q96L12 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALR3Q96L12 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALR3Q96L12 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.26■□□□□ 0.99
CALR3Q96L12 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CALR3Q96L12 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.26■□□□□ 0.99
CALR3Q96L12 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.26■□□□□ 0.99
CALR3Q96L12 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
CALR3Q96L12 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.26■□□□□ 0.99
CALR3Q96L12 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CALR3Q96L12 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.26■□□□□ 0.99
CALR3Q96L12 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.26■□□□□ 0.99
CALR3Q96L12 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.26■□□□□ 0.99
CALR3Q96L12 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.26■□□□□ 0.99
CALR3Q96L12 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.26■□□□□ 0.99
CALR3Q96L12 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALR3Q96L12 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
CALR3Q96L12 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CALR3Q96L12 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALR3Q96L12 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CALR3Q96L12 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALR3Q96L12 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CALR3Q96L12 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CALR3Q96L12 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CALR3Q96L12 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CALR3Q96L12 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CALR3Q96L12 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CALR3Q96L12 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CALR3Q96L12 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CALR3Q96L12 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms