Protein–RNA interactions for Protein: Q96JQ0

DCHS1, Protocadherin-16, humanhuman

Predictions only

Length 3,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS1Q96JQ0 AC104692.2-201ENST00000603054 253 ntBASIC19.48■□□□□ 0.71
DCHS1Q96JQ0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DCHS1Q96JQ0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
DCHS1Q96JQ0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DCHS1Q96JQ0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.47■□□□□ 0.71
DCHS1Q96JQ0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DCHS1Q96JQ0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
DCHS1Q96JQ0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.47■□□□□ 0.71
DCHS1Q96JQ0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
DCHS1Q96JQ0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DCHS1Q96JQ0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DCHS1Q96JQ0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.47■□□□□ 0.71
DCHS1Q96JQ0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.47■□□□□ 0.71
DCHS1Q96JQ0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.47■□□□□ 0.71
DCHS1Q96JQ0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
DCHS1Q96JQ0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
DCHS1Q96JQ0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DCHS1Q96JQ0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DCHS1Q96JQ0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.47■□□□□ 0.71
DCHS1Q96JQ0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 AC092068.2-201ENST00000590491 1708 ntBASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 CKBP1-201ENST00000565489 1086 ntBASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 COX11P1-201ENST00000489116 835 ntBASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
DCHS1Q96JQ0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 ATP5G2P1-201ENST00000433580 426 ntBASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 AL031985.4-201ENST00000642138 673 ntBASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 AC087742.1-201ENST00000575880 1738 ntBASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 AP002982.1-201ENST00000492365 877 ntBASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
DCHS1Q96JQ0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.44■□□□□ 0.7
DCHS1Q96JQ0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.44■□□□□ 0.7
DCHS1Q96JQ0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DCHS1Q96JQ0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.44■□□□□ 0.7
DCHS1Q96JQ0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.44■□□□□ 0.7
DCHS1Q96JQ0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
DCHS1Q96JQ0 DGCR10-201ENST00000609839 495 ntBASIC19.44■□□□□ 0.7
DCHS1Q96JQ0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DCHS1Q96JQ0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.44■□□□□ 0.7
DCHS1Q96JQ0 AC093323.1-202ENST00000635031 2045 ntBASIC19.44■□□□□ 0.7
DCHS1Q96JQ0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
DCHS1Q96JQ0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.44■□□□□ 0.7
DCHS1Q96JQ0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DCHS1Q96JQ0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 HMGA1P5-201ENST00000412453 271 ntBASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DCHS1Q96JQ0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms