Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.21■□□□□ 0.83
ECHDC3Q96DC8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
ECHDC3Q96DC8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC3Q96DC8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 AC020907.5-201ENST00000624372 1936 ntBASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 FAM201B-201ENST00000458407 597 ntBASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 AL031963.3-201ENST00000606441 850 ntBASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC3Q96DC8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 AL390719.1-204ENST00000412397 1219 ntBASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 AC006557.6-201ENST00000623071 864 ntBASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 FEM1AP1-201ENST00000431297 1995 ntBASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC3Q96DC8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 AC008687.6-201ENST00000596318 630 ntBASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 KRT8P20-201ENST00000423953 1409 ntBASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 PKD1P6-201ENST00000343738 4769 ntBASIC20.18■□□□□ 0.82
ECHDC3Q96DC8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 ITM2C-210ENST00000620962 501 ntBASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 KRT8P17-201ENST00000453110 1448 ntBASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
ECHDC3Q96DC8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ECHDC3Q96DC8 HLA-G-202ENST00000376815 851 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms