Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAMP4Q969E2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAMP4Q969E2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAMP4Q969E2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.05■□□□□ 0.8
SCAMP4Q969E2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 POU5F1P3-201ENST00000428824 1078 ntBASIC20.04■□□□□ 0.8
SCAMP4Q969E2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.04■□□□□ 0.8
SCAMP4Q969E2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 PTBP1P-201ENST00000554374 1601 ntBASIC20.04■□□□□ 0.8
SCAMP4Q969E2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCAMP4Q969E2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 SOX15-203ENST00000570788 1093 ntBASIC20.03■□□□□ 0.8
SCAMP4Q969E2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 AC006557.6-201ENST00000623071 864 ntBASIC20.03■□□□□ 0.8
SCAMP4Q969E2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAMP4Q969E2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 FAM201B-201ENST00000458407 597 ntBASIC20.02■□□□□ 0.8
SCAMP4Q969E2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 UNC93B4-201ENST00000505679 747 ntBASIC20.02■□□□□ 0.8
SCAMP4Q969E2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 AP003097.1-201ENST00000530657 1135 ntBASIC20.02■□□□□ 0.8
SCAMP4Q969E2 AC005829.2-201ENST00000571422 1056 ntBASIC20.02■□□□□ 0.8
SCAMP4Q969E2 AC008403.3-201ENST00000598924 454 ntBASIC20.02■□□□□ 0.8
SCAMP4Q969E2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 FEM1AP1-201ENST00000431297 1995 ntBASIC20.02■□□□□ 0.8
SCAMP4Q969E2 SMG8-203ENST00000578922 2178 ntBASIC20.02■□□□□ 0.8
SCAMP4Q969E2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 AL157384.1-201ENST00000445995 2473 ntBASIC20.02■□□□□ 0.8
SCAMP4Q969E2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCAMP4Q969E2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
SCAMP4Q969E2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 AC026366.1-201ENST00000488803 879 ntBASIC20.01■□□□□ 0.79
SCAMP4Q969E2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms