Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.19■□□□□ 0.66
VPS37AQ8NEZ2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS37AQ8NEZ2 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.19■□□□□ 0.66
VPS37AQ8NEZ2 TCF3P1-201ENST00000423021 1937 ntBASIC19.19■□□□□ 0.66
VPS37AQ8NEZ2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.19■□□□□ 0.66
VPS37AQ8NEZ2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS37AQ8NEZ2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
VPS37AQ8NEZ2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS37AQ8NEZ2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
VPS37AQ8NEZ2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS37AQ8NEZ2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS37AQ8NEZ2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS37AQ8NEZ2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS37AQ8NEZ2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 DPP3P2-201ENST00000416030 1696 ntBASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS37AQ8NEZ2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 ZNRF2P3-201ENST00000424200 374 ntBASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 MYCNOS-205ENST00000641950 531 ntBASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VPS37AQ8NEZ2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS37AQ8NEZ2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VPS37AQ8NEZ2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS37AQ8NEZ2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS37AQ8NEZ2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VPS37AQ8NEZ2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS37AQ8NEZ2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.15■□□□□ 0.66
VPS37AQ8NEZ2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
VPS37AQ8NEZ2 UBE2DNL-204ENST00000602536 740 ntBASIC19.15■□□□□ 0.66
VPS37AQ8NEZ2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.15■□□□□ 0.66
VPS37AQ8NEZ2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS37AQ8NEZ2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS37AQ8NEZ2 HCG11-201ENST00000411553 5696 ntBASIC19.15■□□□□ 0.66
VPS37AQ8NEZ2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
VPS37AQ8NEZ2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.15■□□□□ 0.66
VPS37AQ8NEZ2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS37AQ8NEZ2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VPS37AQ8NEZ2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.14■□□□□ 0.66
VPS37AQ8NEZ2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VPS37AQ8NEZ2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VPS37AQ8NEZ2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
VPS37AQ8NEZ2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms