Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 AC233263.1-201ENST00000578059 224 ntBASIC18.7■□□□□ 0.58
BEST3Q8N1M1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 AC027702.1-201ENST00000563810 1770 ntBASIC18.7■□□□□ 0.58
BEST3Q8N1M1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BEST3Q8N1M1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 AP006294.2-201ENST00000641667 209 ntBASIC18.69■□□□□ 0.58
BEST3Q8N1M1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST3Q8N1M1 AC121338.2-201ENST00000622535 1744 ntBASIC18.69■□□□□ 0.58
BEST3Q8N1M1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 AC069544.1-201ENST00000609399 999 ntBASIC18.68■□□□□ 0.58
BEST3Q8N1M1 AL359736.2-201ENST00000621992 437 ntBASIC18.68■□□□□ 0.58
BEST3Q8N1M1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST3Q8N1M1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 POM121L13P-201ENST00000422362 380 ntBASIC18.67■□□□□ 0.58
BEST3Q8N1M1 C1QBPP2-201ENST00000528754 825 ntBASIC18.67■□□□□ 0.58
BEST3Q8N1M1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 AC006557.6-201ENST00000623071 864 ntBASIC18.67■□□□□ 0.58
BEST3Q8N1M1 FEM1AP4-201ENST00000443167 1987 ntBASIC18.67■□□□□ 0.58
BEST3Q8N1M1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST3Q8N1M1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms