Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS52Q8N1B4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.84■■□□□ 1.09
VPS52Q8N1B4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.84■■□□□ 1.09
VPS52Q8N1B4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS52Q8N1B4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS52Q8N1B4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS52Q8N1B4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VPS52Q8N1B4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS52Q8N1B4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS52Q8N1B4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
VPS52Q8N1B4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.84■■□□□ 1.09
VPS52Q8N1B4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
VPS52Q8N1B4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.84■■□□□ 1.09
VPS52Q8N1B4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VPS52Q8N1B4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.83■■□□□ 1.09
VPS52Q8N1B4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VPS52Q8N1B4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VPS52Q8N1B4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS52Q8N1B4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VPS52Q8N1B4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.83■■□□□ 1.09
VPS52Q8N1B4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.83■■□□□ 1.09
VPS52Q8N1B4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VPS52Q8N1B4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VPS52Q8N1B4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.83■■□□□ 1.09
VPS52Q8N1B4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
VPS52Q8N1B4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
VPS52Q8N1B4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.83■■□□□ 1.08
VPS52Q8N1B4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 PGM5P4-201ENST00000421970 445 ntBASIC21.82■■□□□ 1.08
VPS52Q8N1B4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.82■■□□□ 1.08
VPS52Q8N1B4 MTDHP1-201ENST00000605323 784 ntBASIC21.82■■□□□ 1.08
VPS52Q8N1B4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS52Q8N1B4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS52Q8N1B4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.8■■□□□ 1.08
VPS52Q8N1B4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
VPS52Q8N1B4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS52Q8N1B4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VPS52Q8N1B4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
VPS52Q8N1B4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
VPS52Q8N1B4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VPS52Q8N1B4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS52Q8N1B4 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.8■■□□□ 1.08
VPS52Q8N1B4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VPS52Q8N1B4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.8■■□□□ 1.08
VPS52Q8N1B4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
VPS52Q8N1B4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.8■■□□□ 1.08
VPS52Q8N1B4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VPS52Q8N1B4 AC120498.8-201ENST00000614275 531 ntBASIC21.8■■□□□ 1.08
VPS52Q8N1B4 AC006557.6-201ENST00000623071 864 ntBASIC21.8■■□□□ 1.08
VPS52Q8N1B4 AC073912.3-201ENST00000624414 853 ntBASIC21.8■■□□□ 1.08
VPS52Q8N1B4 AL023875.1-201ENST00000640777 796 ntBASIC21.8■■□□□ 1.08
VPS52Q8N1B4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS52Q8N1B4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VPS52Q8N1B4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VPS52Q8N1B4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms