Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF135Q8IUD6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF135Q8IUD6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
RNF135Q8IUD6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF135Q8IUD6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.39■■□□□ 1.01
RNF135Q8IUD6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RNF135Q8IUD6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF135Q8IUD6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF135Q8IUD6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF135Q8IUD6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.39■■□□□ 1.01
RNF135Q8IUD6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF135Q8IUD6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF135Q8IUD6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF135Q8IUD6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
RNF135Q8IUD6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 AC026471.5-201ENST00000615068 467 ntBASIC21.38■■□□□ 1.01
RNF135Q8IUD6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF135Q8IUD6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF135Q8IUD6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF135Q8IUD6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF135Q8IUD6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF135Q8IUD6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF135Q8IUD6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF135Q8IUD6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF135Q8IUD6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.37■■□□□ 1.01
RNF135Q8IUD6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF135Q8IUD6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.37■■□□□ 1.01
RNF135Q8IUD6 AC120498.8-201ENST00000614275 531 ntBASIC21.37■■□□□ 1.01
RNF135Q8IUD6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF135Q8IUD6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF135Q8IUD6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF135Q8IUD6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF135Q8IUD6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF135Q8IUD6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF135Q8IUD6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.36■■□□□ 1.01
RNF135Q8IUD6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 AP003071.4-201ENST00000562276 1284 ntBASIC21.36■■□□□ 1.01
RNF135Q8IUD6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF135Q8IUD6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF135Q8IUD6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms