Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
C9orf139Q6ZV77 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C9orf139Q6ZV77 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
C9orf139Q6ZV77 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C9orf139Q6ZV77 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C9orf139Q6ZV77 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 AL023875.1-201ENST00000640777 796 ntBASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf139Q6ZV77 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 RPS2P55-201ENST00000397318 883 ntBASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 AC107956.1-201ENST00000494359 873 ntBASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf139Q6ZV77 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 Z98882.1-201ENST00000622160 2253 ntBASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 PRKY-204ENST00000533551 1019 ntBASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 RARRES2P10-201ENST00000564312 460 ntBASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 AL121829.2-201ENST00000620908 328 ntBASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
C9orf139Q6ZV77 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 SNORA78-201ENST00000459373 127 ntBASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf139Q6ZV77 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C9orf139Q6ZV77 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms