Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.03■□□□□ 0.96
RAB6CQ53S08 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RAB6CQ53S08 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAB6CQ53S08 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB6CQ53S08 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.03■□□□□ 0.96
RAB6CQ53S08 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAB6CQ53S08 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAB6CQ53S08 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAB6CQ53S08 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.02■□□□□ 0.96
RAB6CQ53S08 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.02■□□□□ 0.96
RAB6CQ53S08 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.02■□□□□ 0.96
RAB6CQ53S08 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.02■□□□□ 0.96
RAB6CQ53S08 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAB6CQ53S08 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAB6CQ53S08 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
RAB6CQ53S08 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.02■□□□□ 0.96
RAB6CQ53S08 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RAB6CQ53S08 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB6CQ53S08 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.01■□□□□ 0.95
RAB6CQ53S08 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB6CQ53S08 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAB6CQ53S08 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RAB6CQ53S08 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAB6CQ53S08 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RAB6CQ53S08 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB6CQ53S08 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB6CQ53S08 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAB6CQ53S08 DUSP5P2-201ENST00000426873 1033 ntBASIC21.01■□□□□ 0.95
RAB6CQ53S08 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.01■□□□□ 0.95
RAB6CQ53S08 C2orf69P4-201ENST00000565394 541 ntBASIC21.01■□□□□ 0.95
RAB6CQ53S08 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.01■□□□□ 0.95
RAB6CQ53S08 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB6CQ53S08 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB6CQ53S08 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB6CQ53S08 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB6CQ53S08 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB6CQ53S08 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB6CQ53S08 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB6CQ53S08 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21■□□□□ 0.95
RAB6CQ53S08 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RAB6CQ53S08 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RAB6CQ53S08 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB6CQ53S08 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB6CQ53S08 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAB6CQ53S08 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RAB6CQ53S08 SLC29A4P1-201ENST00000398760 971 ntBASIC21■□□□□ 0.95
RAB6CQ53S08 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAB6CQ53S08 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21■□□□□ 0.95
RAB6CQ53S08 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21■□□□□ 0.95
RAB6CQ53S08 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21■□□□□ 0.95
RAB6CQ53S08 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAB6CQ53S08 AFG3L1P-217ENST00000557444 2447 ntBASIC21■□□□□ 0.95
RAB6CQ53S08 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RAB6CQ53S08 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21■□□□□ 0.95
RAB6CQ53S08 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21■□□□□ 0.95
RAB6CQ53S08 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RAB6CQ53S08 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB6CQ53S08 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RAB6CQ53S08 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB6CQ53S08 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.99■□□□□ 0.95
RAB6CQ53S08 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.99■□□□□ 0.95
RAB6CQ53S08 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.99■□□□□ 0.95
RAB6CQ53S08 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.99■□□□□ 0.95
RAB6CQ53S08 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.99■□□□□ 0.95
RAB6CQ53S08 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.99■□□□□ 0.95
RAB6CQ53S08 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAB6CQ53S08 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
RAB6CQ53S08 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RAB6CQ53S08 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.99■□□□□ 0.95
RAB6CQ53S08 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
RAB6CQ53S08 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RAB6CQ53S08 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
RAB6CQ53S08 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RAB6CQ53S08 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAB6CQ53S08 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.99■□□□□ 0.95
RAB6CQ53S08 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.99■□□□□ 0.95
RAB6CQ53S08 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB6CQ53S08 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.98■□□□□ 0.95
RAB6CQ53S08 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.98■□□□□ 0.95
RAB6CQ53S08 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB6CQ53S08 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB6CQ53S08 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RAB6CQ53S08 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.98■□□□□ 0.95
RAB6CQ53S08 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.98■□□□□ 0.95
RAB6CQ53S08 AC092118.2-201ENST00000613495 667 ntBASIC20.98■□□□□ 0.95
RAB6CQ53S08 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.98■□□□□ 0.95
RAB6CQ53S08 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAB6CQ53S08 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.98■□□□□ 0.95
RAB6CQ53S08 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.98■□□□□ 0.95
RAB6CQ53S08 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.98■□□□□ 0.95
RAB6CQ53S08 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB6CQ53S08 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB6CQ53S08 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB6CQ53S08 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.98■□□□□ 0.95
RAB6CQ53S08 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB6CQ53S08 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB6CQ53S08 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB6CQ53S08 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB6CQ53S08 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB6CQ53S08 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms