Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 AC006538.3-201ENST00000612495 578 ntBASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 AL121956.5-201ENST00000625261 221 ntBASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.65■□□□□ 0.74
RSPO4Q2I0M5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RSPO4Q2I0M5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 AP000593.1-201ENST00000393668 712 ntBASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 NIFKP9-201ENST00000419265 221 ntBASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 AC124283.5-201ENST00000624661 1809 ntBASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.64■□□□□ 0.73
RSPO4Q2I0M5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 TSPY5P-201ENST00000426936 936 ntBASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 FAM87A-204ENST00000613235 858 ntBASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO4Q2I0M5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 AC092068.2-201ENST00000590491 1708 ntBASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 AC246785.2-201ENST00000432512 513 ntBASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.62■□□□□ 0.73
RSPO4Q2I0M5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.61■□□□□ 0.73
RSPO4Q2I0M5 AP000347.1-202ENST00000435868 847 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms