Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.31■□□□□ 0.84
PRAMEP78395 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.31■□□□□ 0.84
PRAMEP78395 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.31■□□□□ 0.84
PRAMEP78395 AC008694.1-202ENST00000636953 945 ntBASIC20.31■□□□□ 0.84
PRAMEP78395 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PRAMEP78395 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEP78395 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
PRAMEP78395 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEP78395 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.31■□□□□ 0.84
PRAMEP78395 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.31■□□□□ 0.84
PRAMEP78395 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.31■□□□□ 0.84
PRAMEP78395 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEP78395 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEP78395 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
PRAMEP78395 CYP2T1P-201ENST00000432607 1285 ntBASIC20.3■□□□□ 0.84
PRAMEP78395 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.3■□□□□ 0.84
PRAMEP78395 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.3■□□□□ 0.84
PRAMEP78395 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEP78395 AL162377.1-201ENST00000618844 1793 ntBASIC20.3■□□□□ 0.84
PRAMEP78395 AL391422.3-201ENST00000603791 2761 ntBASIC20.3■□□□□ 0.84
PRAMEP78395 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEP78395 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEP78395 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEP78395 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEP78395 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
PRAMEP78395 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
PRAMEP78395 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.3■□□□□ 0.84
PRAMEP78395 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEP78395 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
PRAMEP78395 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEP78395 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PRAMEP78395 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PRAMEP78395 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEP78395 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEP78395 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEP78395 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEP78395 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEP78395 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEP78395 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEP78395 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEP78395 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEP78395 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEP78395 MCRIP2P1-201ENST00000394346 511 ntBASIC20.29■□□□□ 0.84
PRAMEP78395 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEP78395 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
PRAMEP78395 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEP78395 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.29■□□□□ 0.84
PRAMEP78395 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.28■□□□□ 0.84
PRAMEP78395 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.28■□□□□ 0.84
PRAMEP78395 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEP78395 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEP78395 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.28■□□□□ 0.84
PRAMEP78395 SMG8-203ENST00000578922 2178 ntBASIC20.28■□□□□ 0.84
PRAMEP78395 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.28■□□□□ 0.84
PRAMEP78395 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PRAMEP78395 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.28■□□□□ 0.84
PRAMEP78395 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEP78395 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PRAMEP78395 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEP78395 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEP78395 AL137784.2-201ENST00000607332 1000 ntBASIC20.28■□□□□ 0.84
PRAMEP78395 IKBKGP1-201ENST00000612193 1073 ntBASIC20.28■□□□□ 0.84
PRAMEP78395 AC100791.3-201ENST00000617619 330 ntBASIC20.28■□□□□ 0.84
PRAMEP78395 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
PRAMEP78395 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEP78395 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
PRAMEP78395 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEP78395 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEP78395 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEP78395 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.28■□□□□ 0.84
PRAMEP78395 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
PRAMEP78395 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PRAMEP78395 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEP78395 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEP78395 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.27■□□□□ 0.84
PRAMEP78395 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.27■□□□□ 0.84
PRAMEP78395 DPP3P2-201ENST00000416030 1696 ntBASIC20.27■□□□□ 0.84
PRAMEP78395 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEP78395 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.27■□□□□ 0.84
PRAMEP78395 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PRAMEP78395 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.27■□□□□ 0.84
PRAMEP78395 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.27■□□□□ 0.84
PRAMEP78395 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.27■□□□□ 0.84
PRAMEP78395 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEP78395 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.27■□□□□ 0.84
PRAMEP78395 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.27■□□□□ 0.84
PRAMEP78395 AC092437.1-201ENST00000624794 1048 ntBASIC20.27■□□□□ 0.84
PRAMEP78395 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEP78395 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEP78395 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEP78395 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PRAMEP78395 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.27■□□□□ 0.83
PRAMEP78395 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRAMEP78395 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEP78395 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEP78395 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.26■□□□□ 0.83
PRAMEP78395 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEP78395 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.26■□□□□ 0.83
PRAMEP78395 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEP78395 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms