Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
YBX1P67809 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
YBX1P67809 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
YBX1P67809 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
YBX1P67809 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
YBX1P67809 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
YBX1P67809 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
YBX1P67809 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
YBX1P67809 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
YBX1P67809 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
YBX1P67809 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
YBX1P67809 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
YBX1P67809 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
YBX1P67809 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.68■□□□□ 0.74
YBX1P67809 MCRIP2P1-201ENST00000394346 511 ntBASIC19.68■□□□□ 0.74
YBX1P67809 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.68■□□□□ 0.74
YBX1P67809 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.68■□□□□ 0.74
YBX1P67809 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.68■□□□□ 0.74
YBX1P67809 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.68■□□□□ 0.74
YBX1P67809 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.68■□□□□ 0.74
YBX1P67809 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
YBX1P67809 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
YBX1P67809 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
YBX1P67809 AC099778.1-201ENST00000568593 1911 ntBASIC19.68■□□□□ 0.74
YBX1P67809 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.68■□□□□ 0.74
YBX1P67809 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
YBX1P67809 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.68■□□□□ 0.74
YBX1P67809 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
YBX1P67809 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.68■□□□□ 0.74
YBX1P67809 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
YBX1P67809 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.68■□□□□ 0.74
YBX1P67809 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
YBX1P67809 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
YBX1P67809 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
YBX1P67809 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
YBX1P67809 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
YBX1P67809 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.67■□□□□ 0.74
YBX1P67809 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.67■□□□□ 0.74
YBX1P67809 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
YBX1P67809 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.67■□□□□ 0.74
YBX1P67809 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.67■□□□□ 0.74
YBX1P67809 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.67■□□□□ 0.74
YBX1P67809 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
YBX1P67809 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
YBX1P67809 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
YBX1P67809 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.67■□□□□ 0.74
YBX1P67809 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.67■□□□□ 0.74
YBX1P67809 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
YBX1P67809 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
YBX1P67809 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
YBX1P67809 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.66■□□□□ 0.74
YBX1P67809 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YBX1P67809 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
YBX1P67809 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YBX1P67809 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
YBX1P67809 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YBX1P67809 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
YBX1P67809 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
YBX1P67809 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
YBX1P67809 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YBX1P67809 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YBX1P67809 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.66■□□□□ 0.74
YBX1P67809 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.66■□□□□ 0.74
YBX1P67809 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.66■□□□□ 0.74
YBX1P67809 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.66■□□□□ 0.74
YBX1P67809 AC100791.3-201ENST00000617619 330 ntBASIC19.66■□□□□ 0.74
YBX1P67809 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.66■□□□□ 0.74
YBX1P67809 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YBX1P67809 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
YBX1P67809 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
YBX1P67809 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YBX1P67809 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
YBX1P67809 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.66■□□□□ 0.74
YBX1P67809 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
YBX1P67809 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YBX1P67809 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
YBX1P67809 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
YBX1P67809 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
YBX1P67809 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
YBX1P67809 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
YBX1P67809 KRT18P68-201ENST00000392293 1000 ntBASIC19.65■□□□□ 0.74
YBX1P67809 AL355802.2-201ENST00000402069 882 ntBASIC19.65■□□□□ 0.74
YBX1P67809 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.65■□□□□ 0.74
YBX1P67809 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.65■□□□□ 0.74
YBX1P67809 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.65■□□□□ 0.74
YBX1P67809 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.65■□□□□ 0.74
YBX1P67809 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
YBX1P67809 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
YBX1P67809 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
YBX1P67809 AC087633.2-202ENST00000565166 1439 ntBASIC19.65■□□□□ 0.74
YBX1P67809 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
YBX1P67809 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
YBX1P67809 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
YBX1P67809 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
YBX1P67809 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
YBX1P67809 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
YBX1P67809 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
YBX1P67809 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.64■□□□□ 0.74
YBX1P67809 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
YBX1P67809 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms