Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.24■■□□□ 1.15
PEX3P56589 PNMA6B-201ENST00000538162 1200 ntBASIC22.24■■□□□ 1.15
PEX3P56589 AP005212.1-201ENST00000581547 1997 ntBASIC22.24■■□□□ 1.15
PEX3P56589 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
PEX3P56589 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
PEX3P56589 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.24■■□□□ 1.15
PEX3P56589 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PEX3P56589 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.24■■□□□ 1.15
PEX3P56589 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PEX3P56589 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PEX3P56589 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PEX3P56589 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.23■■□□□ 1.15
PEX3P56589 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PEX3P56589 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PEX3P56589 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PEX3P56589 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PEX3P56589 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PEX3P56589 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PEX3P56589 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.23■■□□□ 1.15
PEX3P56589 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PEX3P56589 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
PEX3P56589 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.23■■□□□ 1.15
PEX3P56589 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.23■■□□□ 1.15
PEX3P56589 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
PEX3P56589 MIR4651-201ENST00000582622 73 ntBASIC22.23■■□□□ 1.15
PEX3P56589 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PEX3P56589 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PEX3P56589 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.23■■□□□ 1.15
PEX3P56589 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PEX3P56589 PTBP1P-201ENST00000554374 1601 ntBASIC22.23■■□□□ 1.15
PEX3P56589 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PEX3P56589 AC092667.1-201ENST00000434301 2586 ntBASIC22.23■■□□□ 1.15
PEX3P56589 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PEX3P56589 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.22■■□□□ 1.15
PEX3P56589 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PEX3P56589 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PEX3P56589 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.22■■□□□ 1.15
PEX3P56589 SMG8-203ENST00000578922 2178 ntBASIC22.22■■□□□ 1.15
PEX3P56589 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PEX3P56589 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PEX3P56589 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PEX3P56589 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PEX3P56589 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PEX3P56589 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.22■■□□□ 1.15
PEX3P56589 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PEX3P56589 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PEX3P56589 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.22■■□□□ 1.15
PEX3P56589 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.22■■□□□ 1.15
PEX3P56589 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
PEX3P56589 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PEX3P56589 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.21■■□□□ 1.15
PEX3P56589 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PEX3P56589 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PEX3P56589 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.21■■□□□ 1.15
PEX3P56589 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.21■■□□□ 1.15
PEX3P56589 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.21■■□□□ 1.15
PEX3P56589 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.21■■□□□ 1.15
PEX3P56589 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PEX3P56589 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.21■■□□□ 1.15
PEX3P56589 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.21■■□□□ 1.15
PEX3P56589 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.21■■□□□ 1.15
PEX3P56589 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.21■■□□□ 1.15
PEX3P56589 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.21■■□□□ 1.15
PEX3P56589 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PEX3P56589 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PEX3P56589 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PEX3P56589 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PEX3P56589 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PEX3P56589 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
PEX3P56589 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
PEX3P56589 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.2■■□□□ 1.14
PEX3P56589 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PEX3P56589 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PEX3P56589 UNC93B5-201ENST00000530315 699 ntBASIC22.2■■□□□ 1.14
PEX3P56589 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PEX3P56589 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PEX3P56589 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PEX3P56589 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PEX3P56589 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PEX3P56589 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PEX3P56589 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PEX3P56589 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PEX3P56589 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PEX3P56589 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.19■■□□□ 1.14
PEX3P56589 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.19■■□□□ 1.14
PEX3P56589 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.19■■□□□ 1.14
PEX3P56589 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.19■■□□□ 1.14
PEX3P56589 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.19■■□□□ 1.14
PEX3P56589 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PEX3P56589 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.19■■□□□ 1.14
PEX3P56589 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PEX3P56589 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PEX3P56589 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.19■■□□□ 1.14
PEX3P56589 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.19■■□□□ 1.14
PEX3P56589 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PEX3P56589 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PEX3P56589 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PEX3P56589 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PEX3P56589 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.19■■□□□ 1.14
PEX3P56589 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms