Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AP001412.1-201ENST00000608405 714 ntBASIC29.12■■■□□ 2.25
CLTCL1P53675 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC29.12■■■□□ 2.25
CLTCL1P53675 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
CLTCL1P53675 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CLTCL1P53675 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC29.12■■■□□ 2.25
CLTCL1P53675 H19-201ENST00000411754 1788 ntTSL 5 BASIC29.12■■■□□ 2.25
CLTCL1P53675 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC29.12■■■□□ 2.25
CLTCL1P53675 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CLTCL1P53675 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC29.11■■■□□ 2.25
CLTCL1P53675 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CLTCL1P53675 AL121603.2-201ENST00000557373 2117 ntBASIC29.11■■■□□ 2.25
CLTCL1P53675 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC29.11■■■□□ 2.25
CLTCL1P53675 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC29.11■■■□□ 2.25
CLTCL1P53675 AL353708.3-201ENST00000610272 989 ntBASIC29.11■■■□□ 2.25
CLTCL1P53675 AC026471.5-201ENST00000615068 467 ntBASIC29.11■■■□□ 2.25
CLTCL1P53675 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC29.11■■■□□ 2.25
CLTCL1P53675 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC29.11■■■□□ 2.25
CLTCL1P53675 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC29.11■■■□□ 2.25
CLTCL1P53675 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CLTCL1P53675 KRT17P2-201ENST00000300992 1314 ntBASIC29.11■■■□□ 2.25
CLTCL1P53675 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CLTCL1P53675 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
CLTCL1P53675 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CLTCL1P53675 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC29.1■■■□□ 2.25
CLTCL1P53675 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
CLTCL1P53675 RPS15-203ENST00000586096 570 ntTSL 2 BASIC29.1■■■□□ 2.25
CLTCL1P53675 BID-212ENST00000614949 1988 ntTSL 5 BASIC29.1■■■□□ 2.25
CLTCL1P53675 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC29.1■■■□□ 2.25
CLTCL1P53675 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CLTCL1P53675 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CLTCL1P53675 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC29.1■■■□□ 2.25
CLTCL1P53675 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CLTCL1P53675 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CLTCL1P53675 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
CLTCL1P53675 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CLTCL1P53675 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CLTCL1P53675 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC29.09■■■□□ 2.25
CLTCL1P53675 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CLTCL1P53675 FDX2-207ENST00000494368 584 ntTSL 4 BASIC29.09■■■□□ 2.25
CLTCL1P53675 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC29.09■■■□□ 2.25
CLTCL1P53675 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CLTCL1P53675 AL031963.3-201ENST00000606441 850 ntBASIC29.09■■■□□ 2.25
CLTCL1P53675 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC29.09■■■□□ 2.25
CLTCL1P53675 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CLTCL1P53675 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC29.09■■■□□ 2.25
CLTCL1P53675 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
CLTCL1P53675 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC29.09■■■□□ 2.25
CLTCL1P53675 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
CLTCL1P53675 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC29.09■■■□□ 2.25
CLTCL1P53675 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC29.09■■■□□ 2.25
CLTCL1P53675 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC29.09■■■□□ 2.25
CLTCL1P53675 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
CLTCL1P53675 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CLTCL1P53675 F2R-202ENST00000505600 442 ntTSL 2 BASIC29.09■■■□□ 2.25
CLTCL1P53675 NUDT16P1-203ENST00000513809 620 ntBASIC29.09■■■□□ 2.25
CLTCL1P53675 PPOX-219ENST00000544598 813 ntTSL 2 BASIC29.09■■■□□ 2.25
CLTCL1P53675 PNN-205ENST00000556530 601 ntTSL 2 BASIC29.09■■■□□ 2.25
CLTCL1P53675 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
CLTCL1P53675 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CLTCL1P53675 HTR7P1-201ENST00000538670 1336 ntBASIC29.08■■■□□ 2.25
CLTCL1P53675 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CLTCL1P53675 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC29.08■■■□□ 2.25
CLTCL1P53675 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC29.08■■■□□ 2.25
CLTCL1P53675 FAM210CP-201ENST00000445714 574 ntBASIC29.08■■■□□ 2.25
CLTCL1P53675 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
CLTCL1P53675 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC29.08■■■□□ 2.25
CLTCL1P53675 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CLTCL1P53675 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC29.07■■■□□ 2.24
CLTCL1P53675 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CLTCL1P53675 AL353807.1-201ENST00000427475 662 ntBASIC29.07■■■□□ 2.24
CLTCL1P53675 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC29.07■■■□□ 2.24
CLTCL1P53675 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC29.07■■■□□ 2.24
CLTCL1P53675 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CLTCL1P53675 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CLTCL1P53675 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC29.07■■■□□ 2.24
CLTCL1P53675 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC29.07■■■□□ 2.24
CLTCL1P53675 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CLTCL1P53675 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
CLTCL1P53675 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC29.07■■■□□ 2.24
CLTCL1P53675 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CLTCL1P53675 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CLTCL1P53675 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
CLTCL1P53675 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
CLTCL1P53675 RCN1P1-201ENST00000400413 996 ntBASIC29.06■■■□□ 2.24
CLTCL1P53675 AP003071.4-201ENST00000562276 1284 ntBASIC29.06■■■□□ 2.24
CLTCL1P53675 REXO1L12P-201ENST00000622156 912 ntBASIC29.06■■■□□ 2.24
CLTCL1P53675 AC121338.2-201ENST00000622535 1744 ntBASIC29.06■■■□□ 2.24
CLTCL1P53675 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CLTCL1P53675 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CLTCL1P53675 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC29.06■■■□□ 2.24
CLTCL1P53675 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
CLTCL1P53675 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CLTCL1P53675 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
CLTCL1P53675 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC29.05■■■□□ 2.24
CLTCL1P53675 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CLTCL1P53675 SAPCD2P4-201ENST00000424595 1171 ntBASIC29.05■■■□□ 2.24
CLTCL1P53675 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC29.05■■■□□ 2.24
CLTCL1P53675 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC29.05■■■□□ 2.24
CLTCL1P53675 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CLTCL1P53675 CD177P1-201ENST00000606252 935 ntBASIC29.05■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms