Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF140P52738 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF140P52738 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.12■□□□□ 0.81
ZNF140P52738 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.12■□□□□ 0.81
ZNF140P52738 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.12■□□□□ 0.81
ZNF140P52738 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ZNF140P52738 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF140P52738 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF140P52738 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
ZNF140P52738 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.12■□□□□ 0.81
ZNF140P52738 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF140P52738 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.11■□□□□ 0.81
ZNF140P52738 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF140P52738 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF140P52738 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ZNF140P52738 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
ZNF140P52738 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF140P52738 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF140P52738 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF140P52738 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.11■□□□□ 0.81
ZNF140P52738 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
ZNF140P52738 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.11■□□□□ 0.81
ZNF140P52738 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF140P52738 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.11■□□□□ 0.81
ZNF140P52738 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF140P52738 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF140P52738 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF140P52738 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.11■□□□□ 0.81
ZNF140P52738 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF140P52738 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF140P52738 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF140P52738 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNF140P52738 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF140P52738 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF140P52738 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF140P52738 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.1■□□□□ 0.81
ZNF140P52738 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF140P52738 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF140P52738 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF140P52738 BX119927.1-201ENST00000636596 1552 ntBASIC20.1■□□□□ 0.81
ZNF140P52738 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF140P52738 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNF140P52738 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNF140P52738 DUSP5P2-201ENST00000426873 1033 ntBASIC20.1■□□□□ 0.81
ZNF140P52738 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.1■□□□□ 0.81
ZNF140P52738 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.1■□□□□ 0.81
ZNF140P52738 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.1■□□□□ 0.81
ZNF140P52738 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF140P52738 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ZNF140P52738 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.1■□□□□ 0.81
ZNF140P52738 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF140P52738 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF140P52738 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF140P52738 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
ZNF140P52738 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF140P52738 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF140P52738 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNF140P52738 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF140P52738 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.09■□□□□ 0.81
ZNF140P52738 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
ZNF140P52738 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF140P52738 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF140P52738 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNF140P52738 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
ZNF140P52738 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF140P52738 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
ZNF140P52738 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
ZNF140P52738 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF140P52738 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF140P52738 AC098934.4-201ENST00000564127 592 ntBASIC20.09■□□□□ 0.81
ZNF140P52738 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNF140P52738 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNF140P52738 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.09■□□□□ 0.81
ZNF140P52738 AC104771.1-201ENST00000603335 964 ntBASIC20.09■□□□□ 0.81
ZNF140P52738 AL109923.1-201ENST00000618799 583 ntBASIC20.09■□□□□ 0.81
ZNF140P52738 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.09■□□□□ 0.81
ZNF140P52738 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.09■□□□□ 0.81
ZNF140P52738 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ZNF140P52738 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
ZNF140P52738 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF140P52738 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.09■□□□□ 0.81
ZNF140P52738 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF140P52738 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
ZNF140P52738 AC112907.3-201ENST00000577781 2400 ntBASIC20.08■□□□□ 0.81
ZNF140P52738 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.08■□□□□ 0.81
ZNF140P52738 TCF3P1-201ENST00000423021 1937 ntBASIC20.08■□□□□ 0.81
ZNF140P52738 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
ZNF140P52738 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF140P52738 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ZNF140P52738 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.08■□□□□ 0.81
ZNF140P52738 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF140P52738 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF140P52738 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF140P52738 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ZNF140P52738 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF140P52738 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.08■□□□□ 0.81
ZNF140P52738 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.08■□□□□ 0.81
ZNF140P52738 AL138781.1-201ENST00000566567 1274 ntBASIC20.08■□□□□ 0.81
ZNF140P52738 AL031963.3-201ENST00000606441 850 ntBASIC20.08■□□□□ 0.81
ZNF140P52738 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms