Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 SWI5YDR146C 2130 nt1.67□□□□□ -2.14
SSN8P47821 ZRG8YER033C 3231 nt1.66□□□□□ -2.14
SSN8P47821 YDL240C-AYDL240C-A 138 nt1.66□□□□□ -2.14
SSN8P47821 TMA10YLR327C 261 nt1.66□□□□□ -2.14
SSN8P47821 HDA3YPR179C 1968 nt1.66□□□□□ -2.14
SSN8P47821 SGO1YOR073W 1773 nt1.65□□□□□ -2.14
SSN8P47821 RKM1YPL208W 1752 nt1.65□□□□□ -2.14
SSN8P47821 YDR003W-AYDR003W-A 123 nt1.65□□□□□ -2.15
SSN8P47821 RPS27AYKL156W 249 nt1.65□□□□□ -2.15
SSN8P47821 YAL063C-AYAL063C-A 291 nt1.65□□□□□ -2.15
SSN8P47821 UPS1YLR193C 528 nt1.65□□□□□ -2.15
SSN8P47821 IRA1YBR140C 9279 nt1.65□□□□□ -2.15
SSN8P47821 SAC3YDR159W 3906 nt1.64□□□□□ -2.15
SSN8P47821 RTP1YMR185W 2946 nt1.64□□□□□ -2.15
SSN8P47821 SRP14YDL092W 441 nt1.64□□□□□ -2.15
SSN8P47821 YHR073W-AYHR073W-A 177 nt1.64□□□□□ -2.15
SSN8P47821 ABM1YJR108W 372 nt1.64□□□□□ -2.15
SSN8P47821 HHT1YBR010W 411 nt1.64□□□□□ -2.15
SSN8P47821 BIL1YOR304C-A 231 nt1.64□□□□□ -2.15
SSN8P47821 NUT2YPR168W 474 nt1.64□□□□□ -2.15
SSN8P47821 MEC1YBR136W 7107 nt1.63□□□□□ -2.15
SSN8P47821 TBS1YBR150C 3285 nt1.63□□□□□ -2.15
SSN8P47821 YBP1YBR216C 2025 nt1.63□□□□□ -2.15
SSN8P47821 YDR102CYDR102C 333 nt1.63□□□□□ -2.15
SSN8P47821 YBR174CYBR174C 315 nt1.63□□□□□ -2.15
SSN8P47821 MYO4YAL029C 4416 nt1.63□□□□□ -2.15
SSN8P47821 ZRG17YNR039C 1818 nt1.62□□□□□ -2.15
SSN8P47821 YJR039WYJR039W 3366 nt1.62□□□□□ -2.15
SSN8P47821 YLR146W-AYLR146W-A 189 nt1.62□□□□□ -2.15
SSN8P47821 YOP1YPR028W 543 nt1.62□□□□□ -2.15
SSN8P47821 SEC63YOR254C 1992 nt1.61□□□□□ -2.15
SSN8P47821 LYS14YDR034C 2373 nt1.61□□□□□ -2.15
SSN8P47821 RPL35AYDL191W 363 nt1.61□□□□□ -2.15
SSN8P47821 NHP2YDL208W 471 nt1.61□□□□□ -2.15
SSN8P47821 SBE22YHR103W 2559 nt1.61□□□□□ -2.15
SSN8P47821 MSH5YDL154W 2706 nt1.6□□□□□ -2.15
SSN8P47821 YCR102W-AYCR102W-A 198 nt1.6□□□□□ -2.15
SSN8P47821 YHR007C-AYHR007C-A 216 nt1.6□□□□□ -2.15
SSN8P47821 YIL059CYIL059C 366 nt1.6□□□□□ -2.15
SSN8P47821 YGR250CYGR250C 2346 nt1.6□□□□□ -2.15
SSN8P47821 CHS1YNL192W 3396 nt1.59□□□□□ -2.15
SSN8P47821 YHL037CYHL037C 402 nt1.59□□□□□ -2.15
SSN8P47821 RPL40BYKR094C 387 nt1.59□□□□□ -2.15
SSN8P47821 MDS3YGL197W 4464 nt1.59□□□□□ -2.15
SSN8P47821 MSH6YDR097C 3729 nt1.59□□□□□ -2.16
SSN8P47821 YGR265WYGR265W 411 nt1.58□□□□□ -2.16
SSN8P47821 RFX1YLR176C 2436 nt1.58□□□□□ -2.16
SSN8P47821 EFR3YMR212C 2349 nt1.57□□□□□ -2.16
SSN8P47821 SEY1YOR165W 2331 nt1.57□□□□□ -2.16
SSN8P47821 YJL135WYJL135W 318 nt1.57□□□□□ -2.16
SSN8P47821 YPL038W-AYPL038W-A 192 nt1.57□□□□□ -2.16
SSN8P47821 FMP23YBR047W 528 nt1.57□□□□□ -2.16
SSN8P47821 snR51snR51 107 nt1.57□□□□□ -2.16
SSN8P47821 RLM1YPL089C 2031 nt1.57□□□□□ -2.16
SSN8P47821 YEL057CYEL057C 702 nt1.56□□□□□ -2.16
SSN8P47821 YJR011CYJR011C 786 nt1.56□□□□□ -2.16
SSN8P47821 TRX1YLR043C 312 nt1.56□□□□□ -2.16
SSN8P47821 YMR272W-BYMR272W-B 108 nt1.56□□□□□ -2.16
SSN8P47821 ADR1YDR216W 3972 nt1.56□□□□□ -2.16
SSN8P47821 PIK1YNL267W 3201 nt1.55□□□□□ -2.16
SSN8P47821 MDM20YOL076W 2391 nt1.55□□□□□ -2.16
SSN8P47821 PAU3YCR104W 375 nt1.55□□□□□ -2.16
SSN8P47821 snR72snR72 98 nt1.55□□□□□ -2.16
SSN8P47821 RPL31AYDL075W 342 nt1.55□□□□□ -2.16
SSN8P47821 YDR182W-AYDR182W-A 204 nt1.55□□□□□ -2.16
SSN8P47821 YDR413CYDR413C 576 nt1.55□□□□□ -2.16
SSN8P47821 YER097WYER097W 330 nt1.55□□□□□ -2.16
SSN8P47821 YKL118WYKL118W 312 nt1.55□□□□□ -2.16
SSN8P47821 SSK2YNR031C 4740 nt1.54□□□□□ -2.16
SSN8P47821 YLL032CYLL032C 2478 nt1.54□□□□□ -2.16
SSN8P47821 TFC8YPL007C 1767 nt1.54□□□□□ -2.16
SSN8P47821 YGR109W-BYGR109W-B 4644 nt1.54□□□□□ -2.16
SSN8P47821 SWI6YLR182W 2412 nt1.54□□□□□ -2.16
SSN8P47821 PET127YOR017W 2403 nt1.54□□□□□ -2.16
SSN8P47821 ENV11YGR071C 2583 nt1.53□□□□□ -2.16
SSN8P47821 YFL032WYFL032W 321 nt1.53□□□□□ -2.16
SSN8P47821 FYV8YGR196C 2454 nt1.53□□□□□ -2.16
SSN8P47821 CTR9YOL145C 3234 nt1.53□□□□□ -2.16
SSN8P47821 snR36snR36 182 nt1.53□□□□□ -2.16
SSN8P47821 YCL023CYCL023C 348 nt1.53□□□□□ -2.16
SSN8P47821 PMD1YER132C 5262 nt1.53□□□□□ -2.16
SSN8P47821 YDR426CYDR426C 378 nt1.52□□□□□ -2.17
SSN8P47821 YOR019WYOR019W 2193 nt1.51□□□□□ -2.17
SSN8P47821 YKL136WYKL136W 399 nt1.51□□□□□ -2.17
SSN8P47821 RPL38YLR325C 237 nt1.51□□□□□ -2.17
SSN8P47821 HTB2YBL002W 396 nt1.51□□□□□ -2.17
SSN8P47821 YOR199WYOR199W 330 nt1.51□□□□□ -2.17
SSN8P47821 MAK10YEL053C 2202 nt1.51□□□□□ -2.17
SSN8P47821 IRE1YHR079C 3348 nt1.51□□□□□ -2.17
SSN8P47821 YOR093CYOR093C 4947 nt1.5□□□□□ -2.17
SSN8P47821 KCS1YDR017C 3153 nt1.5□□□□□ -2.17
SSN8P47821 ZIP1YDR285W 2628 nt1.5□□□□□ -2.17
SSN8P47821 YDR048CYDR048C 315 nt1.5□□□□□ -2.17
SSN8P47821 YML007C-AYML007C-A 111 nt1.5□□□□□ -2.17
SSN8P47821 YPR002C-AYPR002C-A 198 nt1.5□□□□□ -2.17
SSN8P47821 TRM732YMR259C 4263 nt1.5□□□□□ -2.17
SSN8P47821 DNF3YMR162C 4971 nt1.5□□□□□ -2.17
SSN8P47821 PAU2YEL049W 363 nt1.49□□□□□ -2.17
SSN8P47821 TAR1YLR154W-C 375 nt1.49□□□□□ -2.17
SSN8P47821 YMR230W-AYMR230W-A 189 nt1.49□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms