Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 SLY1YDR189W 2001 nt0.26□□□□□ -2.37
LSM1P47017 PRE4YFR050C 801 nt0.26□□□□□ -2.37
LSM1P47017 YHR054CYHR054C 1065 nt0.26□□□□□ -2.37
LSM1P47017 POL32YJR043C 1053 nt0.26□□□□□ -2.37
LSM1P47017 HIT1YJR055W 495 nt0.26□□□□□ -2.37
LSM1P47017 GMC2YLR445W 567 nt0.26□□□□□ -2.37
LSM1P47017 YMR304C-AYMR304C-A 351 nt0.26□□□□□ -2.37
LSM1P47017 YPR153WYPR153W 423 nt0.26□□□□□ -2.37
LSM1P47017 WAR1YML076C 2835 nt0.26□□□□□ -2.37
LSM1P47017 LCD1YDR499W 2244 nt0.25□□□□□ -2.37
LSM1P47017 SPO23YBR250W 1572 nt0.25□□□□□ -2.37
LSM1P47017 RRI2YOL117W 1938 nt0.24□□□□□ -2.37
LSM1P47017 BFR2YDR299W 1605 nt0.24□□□□□ -2.37
LSM1P47017 BIR1YJR089W 2865 nt0.24□□□□□ -2.37
LSM1P47017 ENV11YGR071C 2583 nt0.23□□□□□ -2.37
LSM1P47017 YDR182W-AYDR182W-A 204 nt0.23□□□□□ -2.37
LSM1P47017 QCR7YDR529C 384 nt0.23□□□□□ -2.37
LSM1P47017 YER158W-AYER158W-A 216 nt0.23□□□□□ -2.37
LSM1P47017 YHR139C-AYHR139C-A 312 nt0.23□□□□□ -2.37
LSM1P47017 UPS1YLR193C 528 nt0.23□□□□□ -2.37
LSM1P47017 PAN3YKL025C 2040 nt0.22□□□□□ -2.37
LSM1P47017 YDR008CYDR008C 351 nt0.22□□□□□ -2.37
LSM1P47017 MET32YDR253C 576 nt0.22□□□□□ -2.37
LSM1P47017 YGR042WYGR042W 816 nt0.22□□□□□ -2.37
LSM1P47017 RRT1YBL048W 312 nt0.22□□□□□ -2.37
LSM1P47017 YPR099CYPR099C 357 nt0.22□□□□□ -2.37
LSM1P47017 snR84snR84 550 nt0.21□□□□□ -2.38
LSM1P47017 YEL018C-AYEL018C-A 534 nt0.21□□□□□ -2.38
LSM1P47017 CUP1-1YHR053C 186 nt0.21□□□□□ -2.38
LSM1P47017 CUP1-2YHR055C 186 nt0.21□□□□□ -2.38
LSM1P47017 YPL197CYPL197C 414 nt0.21□□□□□ -2.38
LSM1P47017 YPR170CYPR170C 336 nt0.21□□□□□ -2.38
LSM1P47017 CHS6YJL099W 2241 nt0.2□□□□□ -2.38
LSM1P47017 LRP1YHR081W 555 nt0.2□□□□□ -2.38
LSM1P47017 YNL150WYNL150W 408 nt0.2□□□□□ -2.38
LSM1P47017 YNL054W-BYNL054W-B 5250 nt0.2□□□□□ -2.38
LSM1P47017 YKL111CYKL111C 336 nt0.19□□□□□ -2.38
LSM1P47017 YOR282WYOR282W 321 nt0.19□□□□□ -2.38
LSM1P47017 TFB6YOR352W 1032 nt0.19□□□□□ -2.38
LSM1P47017 YEL030C-AYEL030C-A 315 nt0.18□□□□□ -2.38
LSM1P47017 YMR153C-AYMR153C-A 336 nt0.18□□□□□ -2.38
LSM1P47017 YOR029WYOR029W 336 nt0.18□□□□□ -2.38
LSM1P47017 YBR071WYBR071W 636 nt0.18□□□□□ -2.38
LSM1P47017 YBR121C-AYBR121C-A 159 nt0.18□□□□□ -2.38
LSM1P47017 BUD26YDR241W 288 nt0.17□□□□□ -2.38
LSM1P47017 PAU12YGR294W 363 nt0.17□□□□□ -2.38
LSM1P47017 TIM10YHR005C-A 282 nt0.17□□□□□ -2.38
LSM1P47017 RPC10YHR143W-A 213 nt0.17□□□□□ -2.38
LSM1P47017 LIN1YHR156C 1023 nt0.17□□□□□ -2.38
LSM1P47017 YIL134C-AYIL134C-A 204 nt0.17□□□□□ -2.38
LSM1P47017 UBX4YMR067C 1251 nt0.17□□□□□ -2.38
LSM1P47017 NPR2YEL062W 1848 nt0.16□□□□□ -2.38
LSM1P47017 RSM27YGR215W 333 nt0.16□□□□□ -2.38
LSM1P47017 RPS24BYIL069C 408 nt0.16□□□□□ -2.38
LSM1P47017 YLR412C-AYLR412C-A 207 nt0.16□□□□□ -2.38
LSM1P47017 YMR013C-AYMR013C-A 150 nt0.16□□□□□ -2.38
LSM1P47017 SLI15YBR156C 2097 nt0.16□□□□□ -2.38
LSM1P47017 PMP1YCR024C-A 123 nt0.15□□□□□ -2.39
LSM1P47017 CMC1YKL137W 336 nt0.15□□□□□ -2.39
LSM1P47017 YLL032CYLL032C 2478 nt0.15□□□□□ -2.39
LSM1P47017 YJR003CYJR003C 1560 nt0.15□□□□□ -2.39
LSM1P47017 NOP9YJL010C 2001 nt0.14□□□□□ -2.39
LSM1P47017 SBH1YER087C-B 249 nt0.14□□□□□ -2.39
LSM1P47017 RPL26BYGR034W 384 nt0.14□□□□□ -2.39
LSM1P47017 YNL146C-AYNL146C-A 195 nt0.14□□□□□ -2.39
LSM1P47017 RPS30BYOR182C 192 nt0.14□□□□□ -2.39
LSM1P47017 BI4Q0120 1917 nt0.13□□□□□ -2.39
LSM1P47017 RPL9AYGL147C 576 nt0.13□□□□□ -2.39
LSM1P47017 RPL32YBL092W 393 nt0.13□□□□□ -2.39
LSM1P47017 TRS65YGR166W 1683 nt0.13□□□□□ -2.39
LSM1P47017 IQG1YPL242C 4488 nt0.13□□□□□ -2.39
LSM1P47017 BEM3YPL115C 3387 nt0.12□□□□□ -2.39
LSM1P47017 YDR220CYDR220C 294 nt0.12□□□□□ -2.39
LSM1P47017 SPO11YHL022C 1197 nt0.12□□□□□ -2.39
LSM1P47017 YLR146W-AYLR146W-A 189 nt0.12□□□□□ -2.39
LSM1P47017 YLR217WYLR217W 324 nt0.12□□□□□ -2.39
LSM1P47017 AI1Q0050 2505 nt0.12□□□□□ -2.39
LSM1P47017 STE5YDR103W 2754 nt0.11□□□□□ -2.39
LSM1P47017 NPC2YDL046W 522 nt0.11□□□□□ -2.39
LSM1P47017 TAD1YGL243W 1203 nt0.11□□□□□ -2.39
LSM1P47017 YHL042WYHL042W 453 nt0.11□□□□□ -2.39
LSM1P47017 MRPL31YKL138C 396 nt0.11□□□□□ -2.39
LSM1P47017 PPN1YDR452W 2025 nt0.11□□□□□ -2.39
LSM1P47017 YER188C-AYER188C-A 300 nt0.1□□□□□ -2.39
LSM1P47017 YBL062WYBL062W 381 nt0.1□□□□□ -2.39
LSM1P47017 YOL013W-AYOL013W-A 192 nt0.09□□□□□ -2.4
LSM1P47017 YCK3YER123W 1575 nt0.09□□□□□ -2.4
LSM1P47017 ESP1YGR098C 4893 nt0.08□□□□□ -2.4
LSM1P47017 YER076W-AYER076W-A 348 nt0.08□□□□□ -2.4
LSM1P47017 YGR290WYGR290W 444 nt0.08□□□□□ -2.4
LSM1P47017 YLR252WYLR252W 306 nt0.08□□□□□ -2.4
LSM1P47017 YLR271WYLR271W 825 nt0.08□□□□□ -2.4
LSM1P47017 RPL26AYLR344W 384 nt0.08□□□□□ -2.4
LSM1P47017 UBC7YMR022W 498 nt0.08□□□□□ -2.4
LSM1P47017 LOA1YPR139C 903 nt0.08□□□□□ -2.4
LSM1P47017 RFX1YLR176C 2436 nt0.08□□□□□ -2.4
LSM1P47017 YPR096CYPR096C 303 nt0.07□□□□□ -2.4
LSM1P47017 MLP2YIL149C 5040 nt0.06□□□□□ -2.4
LSM1P47017 YER138W-AYER138W-A 105 nt0.06□□□□□ -2.4
LSM1P47017 YGL015CYGL015C 393 nt0.06□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 151.3 ms