Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 YOR192C-AYOR192C-A 1317 nt1.15□□□□□ -2.22
TDA11P38854 LYS14YDR034C 2373 nt1.15□□□□□ -2.22
TDA11P38854 YGL239CYGL239C 315 nt1.15□□□□□ -2.23
TDA11P38854 YGR045CYGR045C 363 nt1.15□□□□□ -2.23
TDA11P38854 YML003WYML003W 873 nt1.15□□□□□ -2.23
TDA11P38854 PIG1YLR273C 1947 nt1.15□□□□□ -2.23
TDA11P38854 AZF1YOR113W 2745 nt1.14□□□□□ -2.23
TDA11P38854 SLX4YLR135W 2247 nt1.14□□□□□ -2.23
TDA11P38854 SRP14YDL092W 441 nt1.14□□□□□ -2.23
TDA11P38854 YDL211CYDL211C 1119 nt1.14□□□□□ -2.23
TDA11P38854 YEL050W-AYEL050W-A 192 nt1.14□□□□□ -2.23
TDA11P38854 URM1YIL008W 300 nt1.14□□□□□ -2.23
TDA11P38854 MKT1YNL085W 2493 nt1.14□□□□□ -2.23
TDA11P38854 RPL34BYIL052C 366 nt1.13□□□□□ -2.23
TDA11P38854 YLR269CYLR269C 351 nt1.13□□□□□ -2.23
TDA11P38854 snR14snR14 160 nt1.13□□□□□ -2.23
TDA11P38854 TSC3YBR058C-A 243 nt1.13□□□□□ -2.23
TDA11P38854 snR189snR189 189 nt1.13□□□□□ -2.23
TDA11P38854 YPR063CYPR063C 423 nt1.13□□□□□ -2.23
TDA11P38854 STB6YKL072W 2301 nt1.12□□□□□ -2.23
TDA11P38854 APL3YBL037W 3078 nt1.12□□□□□ -2.23
TDA11P38854 CLU1YMR012W 3834 nt1.12□□□□□ -2.23
TDA11P38854 VAM6YDL077C 3150 nt1.12□□□□□ -2.23
TDA11P38854 EAF1YDR359C 2949 nt1.12□□□□□ -2.23
TDA11P38854 NBL1YHR199C-A 222 nt1.12□□□□□ -2.23
TDA11P38854 YAL016C-BYAL016C-B 186 nt1.12□□□□□ -2.23
TDA11P38854 PRP16YKR086W 3216 nt1.12□□□□□ -2.23
TDA11P38854 RAD50YNL250W 3939 nt1.12□□□□□ -2.23
TDA11P38854 SCC2YDR180W 4482 nt1.12□□□□□ -2.23
TDA11P38854 YDR182W-AYDR182W-A 204 nt1.11□□□□□ -2.23
TDA11P38854 RPF1YHR088W 888 nt1.11□□□□□ -2.23
TDA11P38854 APL1YJR005W 2103 nt1.11□□□□□ -2.23
TDA11P38854 YLL020CYLL020C 306 nt1.11□□□□□ -2.23
TDA11P38854 SGO1YOR073W 1773 nt1.11□□□□□ -2.23
TDA11P38854 VPS54YDR027C 2670 nt1.11□□□□□ -2.23
TDA11P38854 APL2YKL135C 2181 nt1.1□□□□□ -2.23
TDA11P38854 GDS1YOR355W 1569 nt1.1□□□□□ -2.23
TDA11P38854 YDR114CYDR114C 303 nt1.1□□□□□ -2.23
TDA11P38854 tV(UAC)BtV(UAC)B 74 nt1.1□□□□□ -2.23
TDA11P38854 tV(UAC)DtV(UAC)D 74 nt1.1□□□□□ -2.23
TDA11P38854 RUF22RUF22 515 nt1.1□□□□□ -2.23
TDA11P38854 YOR029WYOR029W 336 nt1.1□□□□□ -2.23
TDA11P38854 ZIP1YDR285W 2628 nt1.1□□□□□ -2.23
TDA11P38854 LAA1YJL207C 6045 nt1.09□□□□□ -2.23
TDA11P38854 YDR169C-AYDR169C-A 150 nt1.09□□□□□ -2.23
TDA11P38854 YEL030C-AYEL030C-A 315 nt1.09□□□□□ -2.23
TDA11P38854 RPL16AYIL133C 600 nt1.09□□□□□ -2.23
TDA11P38854 AIM29YKR074W 468 nt1.09□□□□□ -2.23
TDA11P38854 YLR146W-AYLR146W-A 189 nt1.09□□□□□ -2.23
TDA11P38854 YML108WYML108W 318 nt1.09□□□□□ -2.23
TDA11P38854 YMR153C-AYMR153C-A 336 nt1.09□□□□□ -2.23
TDA11P38854 YNL122CYNL122C 348 nt1.09□□□□□ -2.23
TDA11P38854 NUT2YPR168W 474 nt1.09□□□□□ -2.23
TDA11P38854 ALY2YJL084C 3141 nt1.09□□□□□ -2.24
TDA11P38854 MUK1YPL070W 1839 nt1.08□□□□□ -2.24
TDA11P38854 PHS1YJL097W 654 nt1.08□□□□□ -2.24
TDA11P38854 DOP1YDR141C 5097 nt1.07□□□□□ -2.24
TDA11P38854 YHR125WYHR125W 306 nt1.07□□□□□ -2.24
TDA11P38854 SPT21YMR179W 2277 nt1.06□□□□□ -2.24
TDA11P38854 YIL066W-AYIL066W-A 444 nt1.06□□□□□ -2.24
TDA11P38854 YMR175W-AYMR175W-A 195 nt1.06□□□□□ -2.24
TDA11P38854 RPL9BYNL067W 576 nt1.06□□□□□ -2.24
TDA11P38854 BUD3YCL014W 4911 nt1.06□□□□□ -2.24
TDA11P38854 YLL032CYLL032C 2478 nt1.06□□□□□ -2.24
TDA11P38854 WIP1YDR374W-A 270 nt1.05□□□□□ -2.24
TDA11P38854 YER087C-AYER087C-A 552 nt1.05□□□□□ -2.24
TDA11P38854 BI2Q0110 1272 nt1.05□□□□□ -2.24
TDA11P38854 RFX1YLR176C 2436 nt1.05□□□□□ -2.24
TDA11P38854 NOC3YLR002C 1992 nt1.05□□□□□ -2.24
TDA11P38854 PIP2YOR363C 2991 nt1.05□□□□□ -2.24
TDA11P38854 YDL073WYDL073W 2955 nt1.04□□□□□ -2.24
TDA11P38854 SIP4YJL089W 2490 nt1.04□□□□□ -2.24
TDA11P38854 YER076W-AYER076W-A 348 nt1.04□□□□□ -2.24
TDA11P38854 YGR290WYGR290W 444 nt1.04□□□□□ -2.24
TDA11P38854 YHR130CYHR130C 336 nt1.04□□□□□ -2.24
TDA11P38854 FYV7YLR068W 456 nt1.04□□□□□ -2.24
TDA11P38854 SEC5YDR166C 2916 nt1.03□□□□□ -2.24
TDA11P38854 HCH1YNL281W 462 nt1.03□□□□□ -2.24
TDA11P38854 CDC33YOL139C 642 nt1.03□□□□□ -2.24
TDA11P38854 YPL182CYPL182C 384 nt1.03□□□□□ -2.24
TDA11P38854 EMT1tM(CAU)D 73 nt1.02□□□□□ -2.25
TDA11P38854 EMT5tM(CAU)J1 73 nt1.02□□□□□ -2.25
TDA11P38854 EMT3tM(CAU)J2 73 nt1.02□□□□□ -2.25
TDA11P38854 EMT4tM(CAU)M 73 nt1.02□□□□□ -2.25
TDA11P38854 EMT2tM(CAU)O2 73 nt1.02□□□□□ -2.25
TDA11P38854 YLL054CYLL054C 2532 nt1.02□□□□□ -2.25
TDA11P38854 UBC7YMR022W 498 nt1.02□□□□□ -2.25
TDA11P38854 YNL303WYNL303W 348 nt1.02□□□□□ -2.25
TDA11P38854 YOL013W-BYOL013W-B 291 nt1.02□□□□□ -2.25
TDA11P38854 YOR192C-CYOR192C-C 237 nt1.02□□□□□ -2.25
TDA11P38854 IML1YJR138W 4755 nt1.02□□□□□ -2.25
TDA11P38854 NUP157YER105C 4176 nt1.02□□□□□ -2.25
TDA11P38854 SEC3YER008C 4011 nt1.01□□□□□ -2.25
TDA11P38854 SPO75YLL005C 2607 nt1.01□□□□□ -2.25
TDA11P38854 PAU12YGR294W 363 nt1.01□□□□□ -2.25
TDA11P38854 MRPL31YKL138C 396 nt1.01□□□□□ -2.25
TDA11P38854 ZEO1YOL109W 342 nt1.01□□□□□ -2.25
TDA11P38854 ERP4YOR016C 624 nt1.01□□□□□ -2.25
TDA11P38854 YBR012CYBR012C 420 nt1.01□□□□□ -2.25
TDA11P38854 PAU24YBR301W 363 nt1.01□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 26 ms