Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SCNN1AP37088 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.04■□□□□ 0.96
SCNN1AP37088 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCNN1AP37088 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SCNN1AP37088 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCNN1AP37088 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCNN1AP37088 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SCNN1AP37088 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.03■□□□□ 0.96
SCNN1AP37088 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.03■□□□□ 0.96
SCNN1AP37088 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCNN1AP37088 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.03■□□□□ 0.96
SCNN1AP37088 AC098934.4-201ENST00000564127 592 ntBASIC21.03■□□□□ 0.96
SCNN1AP37088 AC099778.1-201ENST00000568593 1911 ntBASIC21.03■□□□□ 0.96
SCNN1AP37088 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.03■□□□□ 0.96
SCNN1AP37088 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.02■□□□□ 0.96
SCNN1AP37088 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SCNN1AP37088 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
SCNN1AP37088 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.02■□□□□ 0.96
SCNN1AP37088 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.02■□□□□ 0.96
SCNN1AP37088 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.02■□□□□ 0.96
SCNN1AP37088 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SCNN1AP37088 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
SCNN1AP37088 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.02■□□□□ 0.96
SCNN1AP37088 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.02■□□□□ 0.96
SCNN1AP37088 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.02■□□□□ 0.96
SCNN1AP37088 HLA-B-256ENST00000639848 1089 ntBASIC21.02■□□□□ 0.96
SCNN1AP37088 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.02■□□□□ 0.96
SCNN1AP37088 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.02■□□□□ 0.96
SCNN1AP37088 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.02■□□□□ 0.96
SCNN1AP37088 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCNN1AP37088 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SCNN1AP37088 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SCNN1AP37088 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.02■□□□□ 0.95
SCNN1AP37088 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SCNN1AP37088 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.01■□□□□ 0.95
SCNN1AP37088 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SCNN1AP37088 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
SCNN1AP37088 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCNN1AP37088 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
SCNN1AP37088 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCNN1AP37088 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCNN1AP37088 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCNN1AP37088 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.01■□□□□ 0.95
SCNN1AP37088 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCNN1AP37088 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.01■□□□□ 0.95
SCNN1AP37088 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.01■□□□□ 0.95
SCNN1AP37088 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.01■□□□□ 0.95
SCNN1AP37088 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.01■□□□□ 0.95
SCNN1AP37088 AC083880.1-201ENST00000608266 535 ntBASIC21.01■□□□□ 0.95
SCNN1AP37088 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SCNN1AP37088 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SCNN1AP37088 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCNN1AP37088 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.01■□□□□ 0.95
SCNN1AP37088 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCNN1AP37088 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.01■□□□□ 0.95
SCNN1AP37088 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCNN1AP37088 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SCNN1AP37088 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21■□□□□ 0.95
SCNN1AP37088 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCNN1AP37088 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
SCNN1AP37088 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCNN1AP37088 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21■□□□□ 0.95
SCNN1AP37088 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCNN1AP37088 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21■□□□□ 0.95
SCNN1AP37088 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21■□□□□ 0.95
SCNN1AP37088 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
SCNN1AP37088 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SCNN1AP37088 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SCNN1AP37088 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SCNN1AP37088 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21■□□□□ 0.95
SCNN1AP37088 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21■□□□□ 0.95
SCNN1AP37088 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCNN1AP37088 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCNN1AP37088 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SCNN1AP37088 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms