Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.87■■□□□ 1.25
CLCN1P35523 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CLCN1P35523 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.87■■□□□ 1.25
CLCN1P35523 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCN1P35523 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.87■■□□□ 1.25
CLCN1P35523 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCN1P35523 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCN1P35523 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.87■■□□□ 1.25
CLCN1P35523 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CLCN1P35523 AC091305.1-201ENST00000479476 895 ntBASIC22.87■■□□□ 1.25
CLCN1P35523 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.87■■□□□ 1.25
CLCN1P35523 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCN1P35523 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CLCN1P35523 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCN1P35523 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCN1P35523 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCN1P35523 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCN1P35523 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCN1P35523 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
CLCN1P35523 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCN1P35523 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CLCN1P35523 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CLCN1P35523 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
CLCN1P35523 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
CLCN1P35523 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC22.86■■□□□ 1.25
CLCN1P35523 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLCN1P35523 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.86■■□□□ 1.25
CLCN1P35523 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CLCN1P35523 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLCN1P35523 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC22.86■■□□□ 1.25
CLCN1P35523 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CLCN1P35523 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.86■■□□□ 1.25
CLCN1P35523 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLCN1P35523 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
CLCN1P35523 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLCN1P35523 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLCN1P35523 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLCN1P35523 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.85■■□□□ 1.25
CLCN1P35523 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
CLCN1P35523 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLCN1P35523 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLCN1P35523 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLCN1P35523 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC22.85■■□□□ 1.25
CLCN1P35523 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLCN1P35523 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.85■■□□□ 1.25
CLCN1P35523 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CLCN1P35523 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.85■■□□□ 1.25
CLCN1P35523 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.85■■□□□ 1.25
CLCN1P35523 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.85■■□□□ 1.25
CLCN1P35523 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLCN1P35523 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.85■■□□□ 1.25
CLCN1P35523 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLCN1P35523 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLCN1P35523 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC22.85■■□□□ 1.25
CLCN1P35523 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
CLCN1P35523 AC079598.2-202ENST00000546624 1451 ntBASIC22.85■■□□□ 1.25
CLCN1P35523 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CLCN1P35523 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLCN1P35523 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLCN1P35523 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLCN1P35523 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLCN1P35523 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.84■■□□□ 1.25
CLCN1P35523 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLCN1P35523 AC003102.1-202ENST00000563394 1796 ntBASIC22.84■■□□□ 1.25
CLCN1P35523 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
CLCN1P35523 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.84■■□□□ 1.25
CLCN1P35523 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.84■■□□□ 1.25
CLCN1P35523 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC22.84■■□□□ 1.25
CLCN1P35523 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
CLCN1P35523 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.84■■□□□ 1.25
CLCN1P35523 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLCN1P35523 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC22.84■■□□□ 1.25
CLCN1P35523 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLCN1P35523 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLCN1P35523 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.84■■□□□ 1.25
CLCN1P35523 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.84■■□□□ 1.25
CLCN1P35523 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLCN1P35523 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLCN1P35523 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.83■■□□□ 1.25
CLCN1P35523 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CLCN1P35523 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CLCN1P35523 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CLCN1P35523 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.83■■□□□ 1.25
CLCN1P35523 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.83■■□□□ 1.25
CLCN1P35523 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.83■■□□□ 1.25
CLCN1P35523 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.83■■□□□ 1.25
CLCN1P35523 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CLCN1P35523 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CLCN1P35523 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
CLCN1P35523 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CLCN1P35523 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.25
CLCN1P35523 AL133373.2-201ENST00000623187 2828 ntBASIC22.83■■□□□ 1.24
CLCN1P35523 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.83■■□□□ 1.24
CLCN1P35523 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.24
CLCN1P35523 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CLCN1P35523 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CLCN1P35523 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
CLCN1P35523 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.82■■□□□ 1.24
CLCN1P35523 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CLCN1P35523 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms