Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFC1P35251 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
RFC1P35251 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFC1P35251 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFC1P35251 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RFC1P35251 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.27■■□□□ 1
RFC1P35251 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFC1P35251 AL355472.2-201ENST00000422958 438 ntBASIC21.27■■□□□ 1
RFC1P35251 AC026185.1-201ENST00000445748 174 ntBASIC21.27■■□□□ 1
RFC1P35251 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFC1P35251 AC010980.2-201ENST00000587099 1412 ntBASIC21.27■■□□□ 1
RFC1P35251 AC112907.3-201ENST00000577781 2400 ntBASIC21.27■■□□□ 1
RFC1P35251 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.27■□□□□ 0.99
RFC1P35251 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.27■□□□□ 0.99
RFC1P35251 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.27■□□□□ 0.99
RFC1P35251 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
RFC1P35251 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC1P35251 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.26■□□□□ 0.99
RFC1P35251 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.26■□□□□ 0.99
RFC1P35251 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.26■□□□□ 0.99
RFC1P35251 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.26■□□□□ 0.99
RFC1P35251 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC1P35251 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC1P35251 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.26■□□□□ 0.99
RFC1P35251 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.26■□□□□ 0.99
RFC1P35251 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.26■□□□□ 0.99
RFC1P35251 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.26■□□□□ 0.99
RFC1P35251 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.26■□□□□ 0.99
RFC1P35251 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RFC1P35251 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.25■□□□□ 0.99
RFC1P35251 AC099778.1-201ENST00000568593 1911 ntBASIC21.25■□□□□ 0.99
RFC1P35251 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RFC1P35251 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFC1P35251 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RFC1P35251 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC1P35251 DPP3P2-201ENST00000416030 1696 ntBASIC21.25■□□□□ 0.99
RFC1P35251 PCDHAC2-203ENST00000615316 3011 ntBASIC21.25■□□□□ 0.99
RFC1P35251 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RFC1P35251 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RFC1P35251 KRT18P68-201ENST00000392293 1000 ntBASIC21.25■□□□□ 0.99
RFC1P35251 AL512625.2-201ENST00000417533 625 ntBASIC21.25■□□□□ 0.99
RFC1P35251 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.25■□□□□ 0.99
RFC1P35251 CROCCP5-201ENST00000436658 830 ntBASIC21.25■□□□□ 0.99
RFC1P35251 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.25■□□□□ 0.99
RFC1P35251 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.25■□□□□ 0.99
RFC1P35251 AC133552.2-202ENST00000575694 574 ntBASIC21.25■□□□□ 0.99
RFC1P35251 CYP2T3P-201ENST00000601990 817 ntBASIC21.25■□□□□ 0.99
RFC1P35251 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFC1P35251 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RFC1P35251 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.25■□□□□ 0.99
RFC1P35251 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RFC1P35251 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.25■□□□□ 0.99
RFC1P35251 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.25■□□□□ 0.99
RFC1P35251 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC1P35251 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.25■□□□□ 0.99
RFC1P35251 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
RFC1P35251 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFC1P35251 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC1P35251 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RFC1P35251 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RFC1P35251 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC1P35251 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.24■□□□□ 0.99
RFC1P35251 AC092666.2-201ENST00000613287 246 ntBASIC21.24■□□□□ 0.99
RFC1P35251 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.24■□□□□ 0.99
RFC1P35251 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC1P35251 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC1P35251 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFC1P35251 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RFC1P35251 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFC1P35251 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC1P35251 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC1P35251 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.23■□□□□ 0.99
RFC1P35251 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RFC1P35251 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC1P35251 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFC1P35251 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC1P35251 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFC1P35251 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFC1P35251 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC1P35251 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.23■□□□□ 0.99
RFC1P35251 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC1P35251 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.23■□□□□ 0.99
RFC1P35251 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFC1P35251 SLC25A24-204ENST00000569674 2357 ntBASIC21.23■□□□□ 0.99
RFC1P35251 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC1P35251 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC1P35251 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.23■□□□□ 0.99
RFC1P35251 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RFC1P35251 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC1P35251 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.22■□□□□ 0.99
RFC1P35251 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC1P35251 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RFC1P35251 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC1P35251 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.22■□□□□ 0.99
RFC1P35251 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC1P35251 MIR663A-201ENST00000385250 93 ntBASIC21.22■□□□□ 0.99
RFC1P35251 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.22■□□□□ 0.99
RFC1P35251 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.22■□□□□ 0.99
RFC1P35251 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.22■□□□□ 0.99
RFC1P35251 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms