Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN6P29350 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PTPN6P29350 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPN6P29350 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.14■□□□□ 0.65
PTPN6P29350 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.14■□□□□ 0.65
PTPN6P29350 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPN6P29350 RAP2CP1-201ENST00000605103 478 ntBASIC19.14■□□□□ 0.65
PTPN6P29350 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN6P29350 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PTPN6P29350 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN6P29350 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPN6P29350 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN6P29350 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPN6P29350 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN6P29350 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.13■□□□□ 0.65
PTPN6P29350 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN6P29350 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPN6P29350 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN6P29350 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PTPN6P29350 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN6P29350 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPN6P29350 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPN6P29350 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PTPN6P29350 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN6P29350 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN6P29350 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN6P29350 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.13■□□□□ 0.65
PTPN6P29350 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PTPN6P29350 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.13■□□□□ 0.65
PTPN6P29350 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN6P29350 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PTPN6P29350 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PTPN6P29350 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PTPN6P29350 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN6P29350 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN6P29350 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN6P29350 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.12■□□□□ 0.65
PTPN6P29350 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
PTPN6P29350 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN6P29350 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.12■□□□□ 0.65
PTPN6P29350 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN6P29350 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
PTPN6P29350 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN6P29350 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.12■□□□□ 0.65
PTPN6P29350 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPN6P29350 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPN6P29350 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN6P29350 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN6P29350 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPN6P29350 DUX4L16-201ENST00000555130 1264 ntBASIC19.12■□□□□ 0.65
PTPN6P29350 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN6P29350 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.12■□□□□ 0.65
PTPN6P29350 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.12■□□□□ 0.65
PTPN6P29350 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPN6P29350 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
PTPN6P29350 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PTPN6P29350 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN6P29350 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN6P29350 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN6P29350 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN6P29350 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.11■□□□□ 0.65
PTPN6P29350 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.11■□□□□ 0.65
PTPN6P29350 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN6P29350 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.11■□□□□ 0.65
PTPN6P29350 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN6P29350 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN6P29350 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN6P29350 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN6P29350 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PTPN6P29350 AC007322.3-201ENST00000426526 701 ntBASIC19.11■□□□□ 0.65
PTPN6P29350 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN6P29350 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN6P29350 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.11■□□□□ 0.65
PTPN6P29350 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.11■□□□□ 0.65
PTPN6P29350 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN6P29350 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PTPN6P29350 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.11■□□□□ 0.65
PTPN6P29350 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN6P29350 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.11■□□□□ 0.65
PTPN6P29350 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN6P29350 AL691432.2-201ENST00000607222 2038 ntBASIC19.11■□□□□ 0.65
PTPN6P29350 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.11■□□□□ 0.65
PTPN6P29350 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN6P29350 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN6P29350 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
PTPN6P29350 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN6P29350 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN6P29350 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPN6P29350 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN6P29350 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN6P29350 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN6P29350 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.1■□□□□ 0.65
PTPN6P29350 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN6P29350 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN6P29350 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN6P29350 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN6P29350 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.1■□□□□ 0.65
PTPN6P29350 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPN6P29350 AC026185.1-201ENST00000445748 174 ntBASIC19.1■□□□□ 0.65
PTPN6P29350 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms